CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3398
PRO 10.1237
GLN 20.3122
ILE 30.0527
THR 40.0205
LEU 50.0280
TRP 60.0294
GLN 70.0396
ARG 80.0530
PRO 90.0391
LEU 100.0596
VAL 110.0359
THR 120.0458
ILE 130.0332
LYS 140.1274
ILE 150.0300
GLY 160.0200
GLY 170.0418
GLN 180.0490
LEU 190.0442
LYS 200.0254
GLU 210.0131
ALA 220.0723
LEU 230.0369
LEU 240.0224
ASP 250.0210
THR 260.0586
GLY 270.1419
ALA 280.0800
ASP 290.1606
ASP 300.0805
THR 310.1540
VAL 320.0675
LEU 330.0681
GLU 340.0202
GLU 350.0494
MET 360.1018
SER 370.0752
LEU 380.0627
PRO 390.0942
GLY 400.0479
ARG 410.0961
TRP 420.2179
LYS 430.2343
PRO 440.0468
LYS 450.0603
MET 460.1597
ILE 470.0881
GLY 480.0405
GLY 490.1602
ILE 500.0859
GLY 510.0962
GLY 520.0645
PHE 530.1065
ILE 540.0456
LYS 550.0295
VAL 560.0891
ARG 570.1184
GLN 580.1741
TYR 590.0871
ASP 600.0377
GLN 610.1269
ILE 620.0443
LEU 630.0384
ILE 640.0659
GLU 650.0924
ILE 660.0391
CYS 670.0645
GLY 680.0871
HIS 690.0595
LYS 700.0561
ALA 710.0526
ILE 720.0225
GLY 730.0541
THR 740.0257
VAL 750.0663
LEU 760.0892
VAL 770.0576
GLY 780.0562
PRO 790.0689
THR 800.0519
PRO 810.2099
VAL 820.1550
ASN 830.1010
ILE 840.0922
ILE 850.0439
GLY 860.0399
ARG 870.0526
ASN 880.0289
LEU 890.0660
LEU 900.0849
THR 910.0816
GLN 920.0636
ILE 930.0453
GLY 940.0761
CYS 950.0087
THR 960.2748
LEU 970.1260
ASN 980.3398
PHE 990.1285

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.