CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 68  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2949
PRO 10.1479
GLN 20.1507
ILE 30.0884
THR 40.0076
LEU 50.1319
TRP 60.0854
GLN 70.0512
ARG 80.0945
PRO 90.2277
LEU 100.0208
VAL 110.0110
THR 120.0786
ILE 130.0065
LYS 140.0484
ILE 150.0541
GLY 160.0547
GLY 170.0494
GLN 180.0841
LEU 190.0492
LYS 200.0566
GLU 210.0359
ALA 220.0274
LEU 230.0348
LEU 240.0636
ASP 250.0955
THR 260.0312
GLY 270.0834
ALA 280.0227
ASP 290.0271
ASP 300.0182
THR 310.0299
VAL 320.0301
LEU 330.0705
GLU 340.0419
GLU 350.1677
MET 360.0932
SER 370.2803
LEU 380.0907
PRO 390.1124
GLY 400.0828
ARG 410.1527
TRP 420.0772
LYS 430.0237
PRO 440.0791
LYS 450.1400
MET 460.0932
ILE 470.0883
GLY 480.0619
GLY 490.1364
ILE 500.0525
GLY 510.0940
GLY 520.0486
PHE 530.0477
ILE 540.1148
LYS 550.0346
VAL 560.0374
ARG 570.0732
GLN 580.0567
TYR 590.0978
ASP 600.0468
GLN 610.1196
ILE 620.1000
LEU 630.0622
ILE 640.0337
GLU 650.1726
ILE 660.0392
CYS 670.2515
GLY 680.2949
HIS 690.1415
LYS 700.0272
ALA 710.0587
ILE 720.0769
GLY 730.0375
THR 740.0366
VAL 750.0310
LEU 760.0468
VAL 770.0811
GLY 780.0819
PRO 790.1420
THR 800.2194
PRO 810.2245
VAL 820.0973
ASN 830.0917
ILE 840.0507
ILE 850.0332
GLY 860.0396
ARG 870.0698
ASN 880.0180
LEU 890.0317
LEU 900.0349
THR 910.0731
GLN 920.0642
ILE 930.0784
GLY 940.2063
CYS 950.1422
THR 960.1033
LEU 970.0642
ASN 980.0296
PHE 990.0380

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.