CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 7  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ASN 98 0.02 PRO 1 -0.01 GLY 94
PRO 1 0.01 GLN 2 -0.01 THR 26
THR 96 0.01 ILE 3 -0.04 ASN 98
THR 96 0.02 THR 4 -0.06 ASN 98
THR 96 0.02 LEU 5 -0.07 ASN 98
THR 96 0.02 TRP 6 -0.06 ASN 98
THR 96 0.01 GLN 7 -0.05 ASN 98
THR 96 0.01 ARG 8 -0.05 ASN 98
THR 96 0.01 PRO 9 -0.04 ASN 98
THR 96 0.01 LEU 10 -0.03 ASN 98
CYS 95 0.01 VAL 11 -0.01 ASN 98
CYS 95 0.01 THR 12 -0.00 ASN 98
CYS 95 0.01 ILE 13 -0.00 GLN 7
CYS 95 0.01 LYS 14 -0.00 GLN 7
CYS 95 0.01 ILE 15 -0.00 GLN 7
CYS 95 0.01 GLY 16 -0.00 GLN 7
CYS 95 0.01 GLY 17 -0.00 GLN 7
CYS 95 0.01 GLN 18 -0.00 GLN 7
CYS 95 0.01 LEU 19 -0.00 GLN 7
CYS 95 0.01 LYS 20 -0.01 ASN 98
CYS 95 0.01 GLU 21 -0.01 ASN 98
LEU 97 0.01 ALA 22 -0.02 ASN 98
LEU 97 0.01 LEU 23 -0.03 ASN 98
LEU 97 0.01 LEU 24 -0.03 ASN 98
LEU 5 0.01 ASP 25 -0.04 ASN 98
LEU 5 0.01 THR 26 -0.04 ASN 98
TRP 6 0.01 GLY 27 -0.04 ASN 98
TRP 6 0.00 ALA 28 -0.03 ASN 98
TRP 6 0.00 ASP 29 -0.01 ASN 98
LEU 5 0.00 ASP 30 -0.01 ASN 98
CYS 95 0.00 THR 31 -0.01 ASN 98
CYS 95 0.00 VAL 32 -0.01 ASN 98
CYS 95 0.00 LEU 33 -0.01 ASN 98
CYS 95 0.00 GLU 34 -0.01 ASN 98
CYS 95 0.00 GLU 35 -0.01 ASN 98
CYS 95 0.00 MET 36 -0.00 ASN 98
CYS 95 0.00 SER 37 -0.00 ASN 98
CYS 95 0.00 LEU 38 -0.00 THR 91
ASN 98 0.00 PRO 39 -0.00 THR 96
ASN 98 0.00 GLY 40 -0.00 THR 96
ASN 98 0.00 ARG 41 -0.00 THR 96
CYS 95 0.00 TRP 42 -0.00 THR 96
LEU 5 0.00 LYS 43 -0.00 THR 96
LEU 5 0.00 PRO 44 -0.01 ASN 98
LEU 5 0.00 LYS 45 -0.01 ASN 98
TRP 6 0.00 MET 46 -0.01 ASN 98
TRP 6 0.00 ILE 47 -0.02 ASN 98
TRP 6 0.00 GLY 48 -0.02 ASN 98
TRP 6 0.00 GLY 49 -0.02 ASN 98
TRP 6 0.00 ILE 50 -0.03 ASN 98
TRP 6 0.00 GLY 51 -0.02 ASN 98
TRP 6 0.00 GLY 52 -0.02 ASN 98
TRP 6 0.00 PHE 53 -0.02 ASN 98
TRP 6 0.00 ILE 54 -0.02 ASN 98
CYS 95 0.00 LYS 55 -0.01 ASN 98
CYS 95 0.00 VAL 56 -0.01 ASN 98
CYS 95 0.00 ARG 57 -0.01 ASN 98
CYS 95 0.00 GLN 58 -0.00 THR 96
CYS 95 0.00 TYR 59 -0.00 THR 96
ASN 98 0.01 ASP 60 -0.00 THR 96
ASN 98 0.01 GLN 61 -0.00 THR 96
ASN 98 0.01 ILE 62 -0.00 THR 96
ASN 98 0.01 LEU 63 -0.00 THR 96
ASN 98 0.01 ILE 64 -0.00 PRO 1
ASN 98 0.02 GLU 65 -0.00 GLN 7
CYS 95 0.01 ILE 66 -0.00 PRO 1
ASN 98 0.01 CYS 67 -0.00 GLN 7
ASN 98 0.02 GLY 68 -0.00 GLN 7
ASN 98 0.03 HIS 69 -0.00 LEU 10
ASN 98 0.02 LYS 70 -0.00 GLY 94
ASN 98 0.02 ALA 71 -0.00 THR 96
ASN 98 0.02 ILE 72 -0.01 THR 96
ASN 98 0.01 GLY 73 -0.01 THR 96
ASN 98 0.01 THR 74 -0.00 THR 96
CYS 95 0.00 VAL 75 -0.00 THR 96
CYS 95 0.00 LEU 76 -0.01 ASN 98
CYS 95 0.00 VAL 77 -0.01 ASN 98
CYS 95 0.00 GLY 78 -0.01 ASN 98
CYS 95 0.00 PRO 79 -0.01 ASN 98
LEU 97 0.00 THR 80 -0.02 ASN 98
LEU 97 0.00 PRO 81 -0.02 ASN 98
LEU 97 0.00 VAL 82 -0.02 ASN 98
LEU 97 0.00 ASN 83 -0.02 ASN 98
LEU 97 0.00 ILE 84 -0.02 ASN 98
CYS 95 0.01 ILE 85 -0.01 ASN 98
LEU 5 0.00 GLY 86 -0.01 ASN 98
LEU 5 0.01 ARG 87 -0.01 THR 96
ASN 98 0.01 ASN 88 -0.01 THR 96
ASN 98 0.01 LEU 89 -0.01 THR 96
ASN 98 0.01 LEU 90 -0.01 THR 96
ASN 98 0.03 THR 91 -0.01 THR 96
ASN 98 0.03 GLN 92 -0.01 THR 96
ASN 98 0.04 ILE 93 -0.01 PRO 1
ASN 98 0.06 GLY 94 -0.01 THR 96
ASN 98 0.04 CYS 95 -0.03 THR 96
ASN 98 0.11 THR 96 -0.03 CYS 95
THR 96 0.04 LEU 97 -0.06 ASN 98
THR 96 0.11 ASN 98 -0.07 LEU 5

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.