CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3664
PRO 10.0347
GLN 20.1301
ILE 30.2847
THR 40.1062
LEU 50.0486
TRP 60.0846
GLN 70.0532
ARG 80.0484
PRO 90.0542
LEU 100.1183
VAL 110.1405
THR 120.0823
ILE 130.0468
LYS 140.0320
ILE 150.0661
GLY 160.1144
GLY 170.0662
GLN 180.1348
LEU 190.0218
LYS 200.0924
GLU 210.0733
ALA 220.0259
LEU 230.0300
LEU 240.0115
ASP 250.1058
THR 260.0181
GLY 270.0421
ALA 280.0366
ASP 290.0509
ASP 300.0215
THR 310.0258
VAL 320.0162
LEU 330.0261
GLU 340.0689
GLU 350.1311
MET 360.0397
SER 370.1506
LEU 380.0864
PRO 390.1235
GLY 400.2045
ARG 410.0461
TRP 420.0388
LYS 430.0164
PRO 440.0721
LYS 450.0629
MET 460.0467
ILE 470.1298
GLY 480.0526
GLY 490.0907
ILE 500.0527
GLY 510.0634
GLY 520.0974
PHE 530.1752
ILE 540.1985
LYS 550.0749
VAL 560.0376
ARG 570.0741
GLN 580.0652
TYR 590.0323
ASP 600.2084
GLN 610.0643
ILE 620.0535
LEU 630.1081
ILE 640.0782
GLU 650.0372
ILE 660.0504
CYS 670.0884
GLY 680.0372
HIS 690.1369
LYS 700.1131
ALA 710.0842
ILE 720.0632
GLY 730.0850
THR 740.0587
VAL 750.0422
LEU 760.0534
VAL 770.0363
GLY 780.0144
PRO 790.0633
THR 800.0890
PRO 810.0423
VAL 820.0400
ASN 830.0292
ILE 840.0529
ILE 850.0283
GLY 860.0400
ARG 870.0618
ASN 880.0515
LEU 890.0399
LEU 900.1010
THR 910.1813
GLN 920.0448
ILE 930.2060
GLY 940.2002
CYS 950.1315
THR 960.1878
LEU 970.3664
ASN 980.0950
PHE 990.0349

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.