CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 9  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 50 0.62 PRO 1 -0.34 HIS 69
ILE 50 0.65 GLN 2 -0.29 HIS 69
ILE 50 0.68 ILE 3 -0.49 CYS 67
ILE 50 0.59 THR 4 -1.00 LEU 97
ILE 50 0.66 LEU 5 -1.05 LEU 97
GLY 51 0.60 TRP 6 -0.88 LEU 97
GLY 51 0.69 GLN 7 -0.56 LEU 97
ILE 50 0.83 ARG 8 -0.30 LEU 97
ILE 50 0.76 PRO 9 -0.25 CYS 67
ILE 50 0.59 LEU 10 -0.07 LEU 97
ILE 50 0.50 VAL 11 -0.13 THR 12
ILE 50 0.41 THR 12 -0.18 ILE 3
ILE 50 0.39 ILE 13 -0.21 ILE 3
ILE 50 0.31 LYS 14 -0.21 ILE 3
ILE 50 0.29 ILE 15 -0.16 ILE 3
ILE 50 0.21 GLY 16 -0.14 ILE 3
ILE 50 0.20 GLY 17 -0.16 ILE 3
ILE 50 0.21 GLN 18 -0.12 ILE 3
ILE 50 0.26 LEU 19 -0.14 ILE 3
ILE 50 0.32 LYS 20 -0.08 ILE 3
ILE 50 0.41 GLU 21 -0.08 VAL 11
ILE 50 0.54 ALA 22 -0.08 LEU 5
ILE 50 0.71 LEU 23 -0.13 LEU 5
ILE 50 0.73 LEU 24 -0.39 LEU 5
ILE 50 0.89 ASP 25 -0.38 LEU 5
ILE 50 0.83 THR 26 -0.55 LEU 5
ILE 50 0.97 GLY 27 -0.35 TRP 6
ILE 50 0.92 ALA 28 -0.27 LEU 5
GLY 49 0.74 ASP 29 -0.30 LEU 5
GLY 49 0.64 ASP 30 -0.24 LEU 5
ILE 50 0.57 THR 31 -0.21 LEU 5
ILE 50 0.49 VAL 32 -0.11 LEU 5
ILE 50 0.38 LEU 33 -0.07 LEU 5
ILE 50 0.24 GLU 34 -0.06 ILE 47
GLN 7 0.18 GLU 35 -0.05 ILE 47
GLN 7 0.17 MET 36 -0.06 ILE 54
GLN 7 0.13 SER 37 -0.09 ILE 54
ILE 50 0.14 LEU 38 -0.09 ILE 3
ILE 50 0.11 PRO 39 -0.10 ILE 3
ILE 50 0.11 GLY 40 -0.11 THR 4
ILE 50 0.09 ARG 41 -0.12 THR 4
ILE 50 0.09 TRP 42 -0.11 THR 4
ILE 47 0.10 LYS 43 -0.11 LEU 5
ARG 8 0.09 PRO 44 -0.11 PHE 53
ILE 47 0.13 LYS 45 -0.10 LEU 5
LYS 55 0.13 MET 46 -0.07 PHE 53
ASP 29 0.21 ILE 47 -0.17 PRO 79
ASP 29 0.53 GLY 48 -0.20 PRO 79
ALA 28 0.90 GLY 49 -0.17 PRO 79
GLY 27 0.97 ILE 50 -0.03 GLY 52
ARG 8 0.79 GLY 51 -0.07 LYS 55
ARG 8 0.55 GLY 52 -0.11 PRO 44
ALA 28 0.37 PHE 53 -0.11 PRO 44
ARG 8 0.30 ILE 54 -0.15 LYS 55
ARG 8 0.19 LYS 55 -0.15 ILE 54
ARG 8 0.14 VAL 56 -0.06 ILE 54
ARG 8 0.10 ARG 57 -0.10 LYS 55
GLY 49 0.19 GLN 58 -0.13 LEU 5
ILE 50 0.21 TYR 59 -0.15 LEU 5
ILE 50 0.25 ASP 60 -0.19 LEU 5
ILE 50 0.27 GLN 61 -0.21 THR 4
ILE 50 0.28 ILE 62 -0.19 THR 4
ILE 50 0.31 LEU 63 -0.22 THR 4
ILE 50 0.35 ILE 64 -0.22 LEU 5
ILE 50 0.37 GLU 65 -0.30 ILE 3
ILE 50 0.43 ILE 66 -0.34 ILE 3
ILE 50 0.42 CYS 67 -0.49 ILE 3
ILE 50 0.37 GLY 68 -0.45 ILE 3
ILE 50 0.38 HIS 69 -0.44 ILE 3
ILE 50 0.36 LYS 70 -0.33 ILE 3
ILE 50 0.38 ALA 71 -0.33 THR 4
ILE 50 0.35 ILE 72 -0.28 THR 4
ILE 50 0.37 GLY 73 -0.27 LEU 5
ILE 50 0.35 THR 74 -0.22 LEU 5
ILE 50 0.37 VAL 75 -0.18 LEU 5
ILE 50 0.31 LEU 76 -0.13 LEU 5
ILE 50 0.21 VAL 77 -0.07 LEU 5
GLN 7 0.16 GLY 78 -0.07 ILE 47
GLN 7 0.22 PRO 79 -0.20 GLY 48
GLY 51 0.35 THR 80 -0.17 ILE 47
GLY 51 0.46 PRO 81 -0.15 GLY 48
GLY 51 0.55 VAL 82 -0.09 ILE 47
ILE 50 0.53 ASN 83 -0.02 LEU 5
ILE 50 0.71 ILE 84 -0.13 LEU 5
ILE 50 0.65 ILE 85 -0.28 LEU 5
ILE 50 0.72 GLY 86 -0.34 LEU 5
ILE 50 0.65 ARG 87 -0.42 LEU 5
ILE 50 0.54 ASN 88 -0.36 LEU 5
ILE 50 0.52 LEU 89 -0.38 LEU 5
ILE 50 0.58 LEU 90 -0.51 LEU 5
ILE 50 0.52 THR 91 -0.48 LEU 5
ILE 50 0.45 GLN 92 -0.44 THR 4
ILE 50 0.46 ILE 93 -0.51 THR 4
ILE 50 0.48 GLY 94 -0.60 THR 4
ILE 50 0.55 CYS 95 -0.70 THR 4
ILE 50 0.56 THR 96 -0.80 THR 4
ILE 50 0.63 LEU 97 -1.05 LEU 5
ILE 50 0.59 ASN 98 -0.94 THR 4

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.