CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2713
PRO 10.0140
GLN 20.0249
ILE 30.0675
THR 40.0103
LEU 50.0601
TRP 60.0844
GLN 70.0942
ARG 80.0860
PRO 90.1068
LEU 100.1179
VAL 110.0851
THR 120.0600
ILE 130.0338
LYS 140.0952
ILE 150.0769
GLY 160.0601
GLY 170.0435
GLN 180.0222
LEU 190.0958
LYS 200.1342
GLU 210.1832
ALA 220.0825
LEU 230.0681
LEU 240.0806
ASP 250.1001
THR 260.1415
GLY 270.0872
ALA 280.1907
ASP 290.1595
ASP 300.1105
THR 310.1870
VAL 320.1245
LEU 330.0911
GLU 340.1483
GLU 350.0778
MET 360.0352
SER 370.0298
LEU 380.0627
PRO 390.0220
GLY 400.0551
ARG 410.0302
TRP 420.0169
LYS 430.0347
PRO 440.1078
LYS 450.1298
MET 460.0658
ILE 470.0942
GLY 480.0857
GLY 490.0775
ILE 500.1180
GLY 510.0164
GLY 520.1003
PHE 530.0508
ILE 540.0485
LYS 550.1091
VAL 560.0707
ARG 570.1494
GLN 580.0603
TYR 590.0120
ASP 600.1189
GLN 610.1590
ILE 620.1755
LEU 630.0325
ILE 640.0283
GLU 650.0489
ILE 660.0694
CYS 670.0190
GLY 680.0608
HIS 690.1071
LYS 700.0765
ALA 710.0579
ILE 720.1145
GLY 730.1009
THR 740.0571
VAL 750.0940
LEU 760.1094
VAL 770.0731
GLY 780.0406
PRO 790.0523
THR 800.1018
PRO 810.1573
VAL 820.1177
ASN 830.1161
ILE 840.2122
ILE 850.0604
GLY 860.1029
ARG 870.1061
ASN 880.1428
LEU 890.0930
LEU 900.1414
THR 910.1594
GLN 920.1206
ILE 930.2713
GLY 940.1521
CYS 950.0735
THR 960.0494
LEU 970.0591
ASN 980.0286
PHE 990.0322

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.