CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

CA distance fluctuations for 2604200934113787486

---  normal mode 12  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLY 94 0.02 PRO 1 -0.30 LEU 97
LEU 5 0.01 GLN 2 -0.45 LEU 97
ASN 98 0.09 ILE 3 -0.38 LEU 97
ASN 98 0.21 THR 4 -0.34 LEU 97
ASN 98 0.40 LEU 5 -0.15 LEU 97
ASN 98 0.29 TRP 6 -0.14 LEU 97
ASN 98 0.28 GLN 7 -0.07 LEU 97
ASN 98 0.33 ARG 8 -0.01 PRO 1
ASN 98 0.30 PRO 9 -0.02 PRO 1
ASN 98 0.22 LEU 10 -0.01 PRO 1
ASN 98 0.14 VAL 11 -0.02 LEU 97
ASN 98 0.10 THR 12 -0.01 LEU 97
ASN 98 0.09 ILE 13 -0.00 PRO 1
ASN 98 0.06 LYS 14 -0.00 PRO 1
ASN 98 0.07 ILE 15 -0.00 LEU 5
ASN 98 0.06 GLY 16 -0.00 LEU 5
ASN 98 0.05 GLY 17 -0.00 PRO 1
ASN 98 0.07 GLN 18 -0.00 PRO 1
ASN 98 0.08 LEU 19 -0.00 PRO 1
ASN 98 0.12 LYS 20 -0.01 PRO 1
ASN 98 0.15 GLU 21 -0.01 PRO 1
ASN 98 0.20 ALA 22 -0.01 PRO 1
ASN 98 0.27 LEU 23 -0.02 LEU 5
ASN 98 0.31 LEU 24 -0.03 LEU 5
ASN 98 0.39 ASP 25 -0.04 LEU 5
LEU 97 0.53 THR 26 -0.04 LEU 5
ASN 98 0.44 GLY 27 -0.04 LEU 5
LEU 97 0.35 ALA 28 -0.03 LEU 5
LEU 97 0.34 ASP 29 -0.03 LEU 5
LEU 97 0.26 ASP 30 -0.02 LEU 5
LEU 97 0.21 THR 31 -0.02 LEU 5
ASN 98 0.20 VAL 32 -0.02 LEU 5
ASN 98 0.18 LEU 33 -0.01 LEU 5
ASN 98 0.17 GLU 34 -0.01 LEU 5
ASN 98 0.15 GLU 35 -0.01 LEU 5
ASN 98 0.12 MET 36 -0.00 LEU 5
ASN 98 0.10 SER 37 -0.00 LEU 5
LEU 97 0.09 LEU 38 -0.01 LEU 5
LEU 97 0.08 PRO 39 -0.01 LEU 5
LEU 97 0.09 GLY 40 -0.01 LEU 5
LEU 97 0.11 ARG 41 -0.01 LEU 5
LEU 97 0.12 TRP 42 -0.01 LEU 5
LEU 97 0.14 LYS 43 -0.01 LEU 5
LEU 97 0.15 PRO 44 -0.01 LEU 5
LEU 97 0.17 LYS 45 -0.01 LEU 5
ASN 98 0.18 MET 46 -0.02 LEU 5
ASN 98 0.21 ILE 47 -0.02 LEU 5
ASN 98 0.24 GLY 48 -0.02 LEU 5
ASN 98 0.28 GLY 49 -0.02 LEU 5
ASN 98 0.29 ILE 50 -0.02 LEU 5
ASN 98 0.26 GLY 51 -0.02 LEU 5
ASN 98 0.24 GLY 52 -0.02 LEU 5
ASN 98 0.22 PHE 53 -0.02 LEU 5
ASN 98 0.20 ILE 54 -0.02 LEU 5
ASN 98 0.17 LYS 55 -0.01 LEU 5
ASN 98 0.16 VAL 56 -0.01 LEU 5
LEU 97 0.14 ARG 57 -0.01 LEU 5
LEU 97 0.15 GLN 58 -0.01 LEU 5
LEU 97 0.13 TYR 59 -0.01 LEU 5
LEU 97 0.14 ASP 60 -0.01 LEU 5
LEU 97 0.11 GLN 61 -0.01 LEU 5
LEU 97 0.10 ILE 62 -0.01 LEU 5
LEU 97 0.07 LEU 63 -0.01 LEU 5
LEU 97 0.07 ILE 64 -0.00 LEU 5
ASN 98 0.02 GLU 65 -0.00 LEU 5
ASN 98 0.04 ILE 66 -0.00 LEU 5
ILE 3 0.02 CYS 67 -0.06 LEU 97
ILE 3 0.01 GLY 68 -0.06 LEU 97
PRO 1 0.01 HIS 69 -0.05 ASN 98
LEU 97 0.02 LYS 70 -0.03 ASN 98
LEU 97 0.07 ALA 71 -0.01 LEU 5
LEU 97 0.10 ILE 72 -0.01 LEU 5
LEU 97 0.15 GLY 73 -0.01 LEU 5
LEU 97 0.16 THR 74 -0.01 LEU 5
LEU 97 0.16 VAL 75 -0.01 LEU 5
LEU 97 0.17 LEU 76 -0.01 LEU 5
ASN 98 0.15 VAL 77 -0.01 LEU 5
ASN 98 0.17 GLY 78 -0.01 LEU 5
ASN 98 0.19 PRO 79 -0.01 LEU 5
ASN 98 0.21 THR 80 -0.01 LEU 5
ASN 98 0.23 PRO 81 -0.01 LEU 5
ASN 98 0.23 VAL 82 -0.01 LEU 5
ASN 98 0.21 ASN 83 -0.01 LEU 5
ASN 98 0.25 ILE 84 -0.02 LEU 5
ASN 98 0.22 ILE 85 -0.02 LEU 5
LEU 97 0.30 GLY 86 -0.03 LEU 5
LEU 97 0.37 ARG 87 -0.03 THR 4
LEU 97 0.26 ASN 88 -0.02 THR 4
LEU 97 0.19 LEU 89 -0.02 THR 4
LEU 97 0.21 LEU 90 -0.02 ILE 3
LEU 97 0.22 THR 91 -0.02 ILE 3
LEU 97 0.11 GLN 92 -0.02 ASN 98
LEU 97 0.02 ILE 93 -0.05 ASN 98
PRO 1 0.02 GLY 94 -0.14 ASN 98
PRO 1 0.02 CYS 95 -0.04 ILE 3
PRO 1 0.01 THR 96 -0.05 ILE 3
THR 26 0.53 LEU 97 -0.45 GLN 2
THR 26 0.47 ASN 98 -0.14 PRO 1

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.