CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4612
PRO 10.1026
GLN 20.1217
ILE 30.0984
THR 40.1094
LEU 50.1131
TRP 60.1272
GLN 70.0971
ARG 80.0703
PRO 90.0472
LEU 100.0188
VAL 110.0189
THR 120.0190
ILE 130.0158
LYS 140.0244
ILE 150.0168
GLY 160.0239
GLY 170.0385
GLN 180.0382
LEU 190.0337
LYS 200.0235
GLU 210.0141
ALA 220.0162
LEU 230.0264
LEU 240.0354
ASP 250.0472
THR 260.0602
GLY 270.0676
ALA 280.0597
ASP 290.0627
ASP 300.0487
THR 310.0359
VAL 320.0332
LEU 330.0344
GLU 340.0346
GLU 350.0464
MET 360.0580
SER 370.0450
LEU 380.0338
PRO 390.0402
GLY 400.0522
ARG 410.0707
TRP 420.0461
LYS 430.0500
PRO 440.0271
LYS 450.0301
MET 460.0890
ILE 470.1613
GLY 480.2613
GLY 490.3587
ILE 500.4612
GLY 510.3894
GLY 520.3403
PHE 530.2231
ILE 540.1054
LYS 550.0568
VAL 560.0325
ARG 570.0351
GLN 580.0414
TYR 590.0363
ASP 600.0341
GLN 610.0246
ILE 620.0134
LEU 630.0161
ILE 640.0172
GLU 650.0290
ILE 660.0308
CYS 670.0420
GLY 680.0500
HIS 690.0499
LYS 700.0419
ALA 710.0371
ILE 720.0316
GLY 730.0338
THR 740.0349
VAL 750.0316
LEU 760.0356
VAL 770.0342
GLY 780.0294
PRO 790.0275
THR 800.0202
PRO 810.0227
VAL 820.0369
ASN 830.0302
ILE 840.0327
ILE 850.0308
GLY 860.0444
ARG 870.0558
ASN 880.0517
LEU 890.0415
LEU 900.0492
THR 910.0626
GLN 920.0557
ILE 930.0559
GLY 940.0699
CYS 950.0657
THR 960.0786
LEU 970.0444
ASN 980.0133
PHE 990.0218

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.