CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

CA distance fluctuations for 2604200934113787486

---  normal mode 13  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 50 0.71 PRO 1 -0.22 HIS 69
ILE 50 0.68 GLN 2 -0.48 CYS 95
ILE 50 0.82 ILE 3 -0.20 CYS 95
ILE 50 0.78 THR 4 -0.27 THR 96
ILE 50 0.84 LEU 5 -0.33 ASN 98
ILE 50 0.69 TRP 6 -0.31 ASN 98
ILE 50 0.74 GLN 7 -0.20 ASN 98
ILE 50 0.91 ARG 8 -0.14 ASN 98
ILE 50 0.96 PRO 9 -0.07 CYS 95
ILE 50 0.84 LEU 10 -0.05 MET 36
ILE 50 0.76 VAL 11 -0.09 MET 36
ILE 50 0.64 THR 12 -0.13 MET 36
ILE 50 0.62 ILE 13 -0.17 MET 36
ILE 50 0.52 LYS 14 -0.22 MET 36
ILE 50 0.48 ILE 15 -0.28 MET 36
ILE 50 0.39 GLY 16 -0.32 MET 36
ILE 50 0.39 GLY 17 -0.26 MET 36
ILE 50 0.40 GLN 18 -0.30 MET 36
ILE 50 0.47 LEU 19 -0.22 MET 36
ILE 50 0.53 LYS 20 -0.18 MET 36
ILE 50 0.63 GLU 21 -0.10 GLU 35
ILE 50 0.80 ALA 22 -0.07 MET 36
ILE 50 1.01 LEU 23 -0.06 GLN 2
ILE 50 1.11 LEU 24 -0.14 GLN 2
ILE 50 1.39 ASP 25 -0.12 LEU 5
ILE 50 1.27 THR 26 -0.17 LEU 97
ILE 50 1.37 GLY 27 -0.15 ASN 98
GLY 49 1.72 ALA 28 -0.11 GLN 2
GLY 49 1.17 ASP 29 -0.13 GLN 2
GLY 48 0.98 ASP 30 -0.13 GLN 2
GLY 49 0.86 THR 31 -0.13 GLN 2
ILE 50 0.65 VAL 32 -0.09 GLN 2
ILE 50 0.55 LEU 33 -0.09 GLN 2
ILE 50 0.41 GLU 34 -0.16 LYS 20
ILE 50 0.28 GLU 35 -0.22 GLN 18
ILE 50 0.30 MET 36 -0.32 GLY 16
ILE 50 0.29 SER 37 -0.32 GLY 16
ILE 50 0.31 LEU 38 -0.07 GLN 2
ILE 50 0.27 PRO 39 -0.08 LYS 55
ILE 50 0.24 GLY 40 -0.09 GLN 2
SER 37 0.19 ARG 41 -0.09 GLN 2
ILE 50 0.18 TRP 42 -0.09 GLN 2
SER 37 0.12 LYS 43 -0.09 GLN 2
SER 37 0.08 PRO 44 -0.07 PRO 39
THR 74 0.11 LYS 45 -0.10 THR 80
ASP 30 0.43 MET 46 -0.06 PRO 44
ASP 30 0.86 ILE 47 -0.06 PRO 81
ALA 28 1.16 GLY 48 -0.03 MET 46
ALA 28 1.72 GLY 49 -0.02 PHE 53
ASP 25 1.39 ILE 50 -0.01 GLY 52
GLY 27 1.11 GLY 51 -0.01 GLY 52
GLY 27 1.03 GLY 52 -0.06 PRO 44
ALA 28 0.80 PHE 53 -0.05 PRO 44
ALA 28 0.45 ILE 54 -0.05 ILE 47
ASP 29 0.28 LYS 55 -0.08 PRO 39
ILE 50 0.14 VAL 56 -0.10 THR 80
ILE 50 0.19 ARG 57 -0.08 GLN 2
ILE 47 0.32 GLN 58 -0.10 GLN 2
GLY 49 0.33 TYR 59 -0.11 GLN 2
GLY 49 0.38 ASP 60 -0.13 GLN 2
GLY 49 0.42 GLN 61 -0.14 GLN 2
ILE 50 0.45 ILE 62 -0.14 GLN 2
ILE 50 0.49 LEU 63 -0.16 MET 36
ILE 50 0.56 ILE 64 -0.17 MET 36
ILE 50 0.59 GLU 65 -0.16 GLN 2
ILE 50 0.68 ILE 66 -0.19 GLN 2
ILE 50 0.66 CYS 67 -0.16 GLN 2
ILE 50 0.59 GLY 68 -0.17 PRO 1
ILE 50 0.61 HIS 69 -0.24 GLN 2
ILE 50 0.57 LYS 70 -0.20 GLN 2
ILE 50 0.60 ALA 71 -0.22 GLN 2
ILE 50 0.54 ILE 72 -0.18 GLN 2
GLY 49 0.57 GLY 73 -0.17 GLN 2
GLY 49 0.53 THR 74 -0.14 GLN 2
GLY 49 0.53 VAL 75 -0.13 GLN 2
ILE 47 0.47 LEU 76 -0.10 GLN 2
ILE 50 0.36 VAL 77 -0.10 ILE 15
ILE 50 0.26 GLY 78 -0.12 GLN 18
ILE 50 0.23 PRO 79 -0.13 GLN 18
GLY 51 0.42 THR 80 -0.10 VAL 56
GLY 51 0.44 PRO 81 -0.08 LYS 45
ILE 50 0.63 VAL 82 -0.06 LYS 45
ILE 50 0.71 ASN 83 -0.06 GLN 2
ILE 50 0.97 ILE 84 -0.09 GLN 2
ILE 50 0.97 ILE 85 -0.15 GLN 2
GLY 49 1.14 GLY 86 -0.16 GLN 2
GLY 49 1.03 ARG 87 -0.20 GLN 2
GLY 49 0.84 ASN 88 -0.20 GLN 2
GLY 49 0.78 LEU 89 -0.22 GLN 2
ILE 50 0.86 LEU 90 -0.28 GLN 2
ILE 50 0.76 THR 91 -0.30 GLN 2
ILE 50 0.67 GLN 92 -0.28 GLN 2
ILE 50 0.70 ILE 93 -0.35 GLN 2
ILE 50 0.71 GLY 94 -0.41 GLN 2
ILE 50 0.81 CYS 95 -0.48 GLN 2
ILE 50 0.82 THR 96 -0.42 GLN 2
ILE 50 0.80 LEU 97 -0.30 LEU 5
ILE 50 0.67 ASN 98 -0.33 LEU 5

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.