CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

CA strain for 2604200934113787486

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 0.0009
GLN 2ILE 3 -0.0027
ILE 3THR 4 -0.0115
THR 4LEU 5 -0.0025
LEU 5TRP 6 -0.0036
TRP 6GLN 7 0.0003
GLN 7ARG 8 -0.0120
ARG 8PRO 9 -0.0313
PRO 9LEU 10 -0.0076
LEU 10VAL 11 0.0112
VAL 11THR 12 0.0172
THR 12ILE 13 -0.0033
ILE 13LYS 14 -0.0100
LYS 14ILE 15 -0.0006
ILE 15GLY 16 -0.0030
GLY 16GLY 17 0.0109
GLY 17GLN 18 -0.0108
GLN 18LEU 19 0.0057
LEU 19LYS 20 -0.0083
LYS 20GLU 21 -0.0096
GLU 21ALA 22 0.0224
ALA 22LEU 23 -0.0171
LEU 23LEU 24 0.0107
LEU 24ASP 25 -0.0016
ASP 25THR 26 0.0037
THR 26GLY 27 -0.0007
GLY 27ALA 28 0.0006
ALA 28ASP 29 0.0031
ASP 29ASP 30 0.0019
ASP 30THR 31 -0.0111
THR 31VAL 32 0.0345
VAL 32LEU 33 0.0061
LEU 33GLU 34 -0.0237
GLU 34GLU 35 0.0163
GLU 35MET 36 -0.0008
MET 36SER 37 -0.0054
SER 37LEU 38 0.0026
LEU 38PRO 39 0.0051
PRO 39GLY 40 -0.0018
GLY 40ARG 41 0.0155
ARG 41TRP 42 -0.0064
TRP 42LYS 43 0.0021
LYS 43PRO 44 -0.0298
PRO 44LYS 45 0.0116
LYS 45MET 46 0.0359
MET 46ILE 47 -0.0743
ILE 47GLY 48 0.0102
GLY 48GLY 49 0.0350
GLY 49ILE 50 -0.0234
ILE 50GLY 51 -0.0258
GLY 51GLY 52 0.0103
GLY 52PHE 53 0.1188
PHE 53ILE 54 0.0362
ILE 54LYS 55 -0.1363
LYS 55VAL 56 0.0188
VAL 56ARG 57 -0.0384
ARG 57GLN 58 0.0020
GLN 58TYR 59 0.0041
TYR 59ASP 60 -0.0156
ASP 60GLN 61 0.0070
GLN 61ILE 62 -0.0085
ILE 62LEU 63 -0.0137
LEU 63ILE 64 0.0043
ILE 64GLU 65 0.0124
GLU 65ILE 66 -0.0035
ILE 66CYS 67 0.0031
CYS 67GLY 68 -0.0035
GLY 68HIS 69 0.0076
HIS 69LYS 70 -0.0024
LYS 70ALA 71 -0.0033
ALA 71ILE 72 -0.0021
ILE 72GLY 73 -0.0003
GLY 73THR 74 0.0050
THR 74VAL 75 -0.0193
VAL 75LEU 76 0.0120
LEU 76VAL 77 -0.0015
VAL 77GLY 78 -0.0313
GLY 78PRO 79 0.0225
PRO 79THR 80 0.0271
THR 80PRO 81 0.0045
PRO 81VAL 82 0.0007
VAL 82ASN 83 -0.0179
ASN 83ILE 84 0.0050
ILE 84ILE 85 0.0022
ILE 85GLY 86 -0.0027
GLY 86ARG 87 0.0070
ARG 87ASN 88 -0.0160
ASN 88LEU 89 0.0036
LEU 89LEU 90 0.0071
LEU 90THR 91 -0.0042
THR 91GLN 92 -0.0026
GLN 92ILE 93 0.0076
ILE 93GLY 94 -0.0048
GLY 94CYS 95 0.0042
CYS 95THR 96 0.0054
THR 96LEU 97 -0.0066
LEU 97ASN 98 0.0012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.