CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2561
PRO 10.1818
GLN 20.0944
ILE 30.1889
THR 40.1668
LEU 50.1107
TRP 60.0781
GLN 70.0581
ARG 80.1246
PRO 90.1272
LEU 100.1089
VAL 110.0643
THR 120.0576
ILE 130.0535
LYS 140.0680
ILE 150.0802
GLY 160.2501
GLY 170.1738
GLN 180.1352
LEU 190.1368
LYS 200.0995
GLU 210.0986
ALA 220.0857
LEU 230.0666
LEU 240.0632
ASP 250.0585
THR 260.0944
GLY 270.1913
ALA 280.1291
ASP 290.1233
ASP 300.0648
THR 310.0665
VAL 320.1134
LEU 330.0688
GLU 340.0174
GLU 350.0360
MET 360.0529
SER 370.0873
LEU 380.1212
PRO 390.1297
GLY 400.1565
ARG 410.1679
TRP 420.1131
LYS 430.1012
PRO 440.0421
LYS 450.0190
MET 460.0541
ILE 470.0633
GLY 480.0416
GLY 490.0487
ILE 500.0513
GLY 510.0754
GLY 520.0502
PHE 530.0539
ILE 540.0466
LYS 550.0364
VAL 560.0362
ARG 570.0395
GLN 580.0241
TYR 590.0345
ASP 600.0495
GLN 610.0574
ILE 620.0614
LEU 630.0549
ILE 640.0759
GLU 650.0559
ILE 660.0522
CYS 670.1683
GLY 680.1105
HIS 690.0483
LYS 700.0533
ALA 710.0620
ILE 720.0143
GLY 730.0300
THR 740.0198
VAL 750.0474
LEU 760.0646
VAL 770.0453
GLY 780.0274
PRO 790.0552
THR 800.0967
PRO 810.2561
VAL 820.0453
ASN 830.0815
ILE 840.1152
ILE 850.0646
GLY 860.0324
ARG 870.0660
ASN 880.0618
LEU 890.0581
LEU 900.0896
THR 910.0869
GLN 920.0595
ILE 930.0514
GLY 940.1353
CYS 950.1847
THR 960.2326
LEU 970.1874
ASN 980.0718
PHE 990.1079

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.