CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2749
PRO 10.0134
GLN 20.0072
ILE 30.0437
THR 40.1583
LEU 50.0483
TRP 60.2109
GLN 70.1755
ARG 80.2749
PRO 90.1100
LEU 100.0459
VAL 110.0999
THR 120.0755
ILE 130.0816
LYS 140.0322
ILE 150.0381
GLY 160.1343
GLY 170.1029
GLN 180.0532
LEU 190.0493
LYS 200.0597
GLU 210.0430
ALA 220.0719
LEU 230.1292
LEU 240.1092
ASP 250.0856
THR 260.0610
GLY 270.0818
ALA 280.0716
ASP 290.0671
ASP 300.0674
THR 310.0712
VAL 320.0653
LEU 330.0612
GLU 340.0466
GLU 350.0694
MET 360.0619
SER 370.0682
LEU 380.0607
PRO 390.0660
GLY 400.0342
ARG 410.2114
TRP 420.0918
LYS 430.1306
PRO 440.0859
LYS 450.0480
MET 460.0391
ILE 470.1063
GLY 480.1047
GLY 490.0596
ILE 500.0462
GLY 510.0524
GLY 520.0632
PHE 530.0568
ILE 540.1055
LYS 550.0962
VAL 560.1119
ARG 570.0563
GLN 580.0390
TYR 590.0125
ASP 600.0508
GLN 610.0607
ILE 620.0825
LEU 630.0839
ILE 640.1600
GLU 650.1303
ILE 660.1186
CYS 670.1292
GLY 680.1529
HIS 690.0855
LYS 700.0976
ALA 710.0403
ILE 720.0275
GLY 730.0815
THR 740.0578
VAL 750.0583
LEU 760.0753
VAL 770.0538
GLY 780.0513
PRO 790.0853
THR 800.0828
PRO 810.1510
VAL 820.0761
ASN 830.0701
ILE 840.0825
ILE 850.0915
GLY 860.0705
ARG 870.0670
ASN 880.0733
LEU 890.0926
LEU 900.0590
THR 910.0727
GLN 920.0590
ILE 930.0608
GLY 940.1943
CYS 950.2221
THR 960.2700
LEU 970.2005
ASN 980.0891
PHE 990.0991

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.