CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3618
PRO 10.1117
GLN 20.0640
ILE 30.1445
THR 40.1457
LEU 50.0777
TRP 60.1078
GLN 70.0778
ARG 80.1085
PRO 90.0952
LEU 100.0077
VAL 110.0355
THR 120.0415
ILE 130.0705
LYS 140.0273
ILE 150.0722
GLY 160.2199
GLY 170.1015
GLN 180.2848
LEU 190.1049
LYS 200.0540
GLU 210.0410
ALA 220.0305
LEU 230.0331
LEU 240.0343
ASP 250.0275
THR 260.0595
GLY 270.1313
ALA 280.0895
ASP 290.1187
ASP 300.0676
THR 310.0429
VAL 320.0186
LEU 330.0198
GLU 340.0326
GLU 350.0520
MET 360.0898
SER 370.0979
LEU 380.0606
PRO 390.0498
GLY 400.1202
ARG 410.0661
TRP 420.0956
LYS 430.1092
PRO 440.0080
LYS 450.0225
MET 460.0278
ILE 470.0283
GLY 480.0380
GLY 490.0405
ILE 500.0379
GLY 510.0500
GLY 520.0478
PHE 530.0328
ILE 540.0135
LYS 550.0278
VAL 560.0264
ARG 570.0126
GLN 580.0260
TYR 590.0281
ASP 600.0788
GLN 610.1031
ILE 620.1192
LEU 630.0909
ILE 640.1117
GLU 650.1107
ILE 660.1091
CYS 670.1228
GLY 680.1687
HIS 690.0967
LYS 700.0751
ALA 710.0532
ILE 720.0479
GLY 730.0476
THR 740.0435
VAL 750.0332
LEU 760.0185
VAL 770.0182
GLY 780.0246
PRO 790.0244
THR 800.0135
PRO 810.1683
VAL 820.0269
ASN 830.0226
ILE 840.0157
ILE 850.0175
GLY 860.0464
ARG 870.0864
ASN 880.0993
LEU 890.0798
LEU 900.0713
THR 910.0888
GLN 920.1589
ILE 930.1301
GLY 940.1551
CYS 950.2065
THR 960.3618
LEU 970.2046
ASN 980.1966
PHE 990.2323

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.