CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3593
PRO 10.0227
GLN 20.0232
ILE 30.0297
THR 40.0610
LEU 50.0577
TRP 60.2532
GLN 70.3150
ARG 80.1360
PRO 90.1377
LEU 100.0581
VAL 110.0394
THR 120.0389
ILE 130.0507
LYS 140.0513
ILE 150.0279
GLY 160.0742
GLY 170.0794
GLN 180.0496
LEU 190.0441
LYS 200.0428
GLU 210.0547
ALA 220.0289
LEU 230.0557
LEU 240.0705
ASP 250.0491
THR 260.1658
GLY 270.2975
ALA 280.1026
ASP 290.0284
ASP 300.0647
THR 310.0839
VAL 320.0670
LEU 330.0789
GLU 340.0834
GLU 350.0855
MET 360.1092
SER 370.0872
LEU 380.0384
PRO 390.0916
GLY 400.1958
ARG 410.0980
TRP 420.1090
LYS 430.1571
PRO 440.0194
LYS 450.0614
MET 460.0443
ILE 470.0200
GLY 480.0435
GLY 490.0217
ILE 500.0215
GLY 510.0483
GLY 520.0737
PHE 530.0162
ILE 540.0706
LYS 550.0516
VAL 560.0329
ARG 570.0187
GLN 580.0790
TYR 590.0656
ASP 600.0646
GLN 610.0080
ILE 620.0199
LEU 630.0166
ILE 640.0063
GLU 650.0157
ILE 660.0181
CYS 670.0335
GLY 680.0378
HIS 690.0105
LYS 700.0133
ALA 710.0249
ILE 720.0460
GLY 730.0302
THR 740.0771
VAL 750.0609
LEU 760.0622
VAL 770.0705
GLY 780.0846
PRO 790.0885
THR 800.0912
PRO 810.2302
VAL 820.1238
ASN 830.0664
ILE 840.0824
ILE 850.0626
GLY 860.0362
ARG 870.0735
ASN 880.0474
LEU 890.0670
LEU 900.1080
THR 910.0525
GLN 920.0441
ILE 930.0305
GLY 940.0387
CYS 950.0927
THR 960.2477
LEU 970.0870
ASN 980.3593
PHE 990.2342

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.