CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3908
PRO 10.0184
GLN 20.0263
ILE 30.0333
THR 40.0040
LEU 50.0295
TRP 60.0396
GLN 70.0513
ARG 80.0554
PRO 90.0500
LEU 100.0354
VAL 110.0514
THR 120.0235
ILE 130.0397
LYS 140.1633
ILE 150.2788
GLY 160.0812
GLY 170.1584
GLN 180.0632
LEU 190.0716
LYS 200.2651
GLU 210.0282
ALA 220.0469
LEU 230.0219
LEU 240.0320
ASP 250.0464
THR 260.0508
GLY 270.0504
ALA 280.0414
ASP 290.0439
ASP 300.0318
THR 310.0369
VAL 320.0221
LEU 330.0382
GLU 340.0316
GLU 350.0390
MET 360.3908
SER 370.1126
LEU 380.1176
PRO 390.1177
GLY 400.1793
ARG 410.0407
TRP 420.1111
LYS 430.1607
PRO 440.1972
LYS 450.0909
MET 460.1196
ILE 470.0627
GLY 480.0962
GLY 490.0294
ILE 500.0166
GLY 510.0424
GLY 520.0878
PHE 530.0237
ILE 540.0649
LYS 550.0755
VAL 560.0759
ARG 570.0784
GLN 580.0654
TYR 590.0821
ASP 600.1179
GLN 610.0541
ILE 620.0260
LEU 630.0916
ILE 640.1729
GLU 650.1827
ILE 660.0863
CYS 670.0952
GLY 680.0472
HIS 690.0635
LYS 700.0951
ALA 710.0746
ILE 720.0847
GLY 730.0864
THR 740.0709
VAL 750.0437
LEU 760.0568
VAL 770.0616
GLY 780.0426
PRO 790.0583
THR 800.0458
PRO 810.0882
VAL 820.2779
ASN 830.0781
ILE 840.0382
ILE 850.0385
GLY 860.0457
ARG 870.0429
ASN 880.0353
LEU 890.0160
LEU 900.0548
THR 910.0443
GLN 920.0580
ILE 930.0368
GLY 940.1455
CYS 950.1213
THR 960.1526
LEU 970.0940
ASN 980.0969
PHE 990.1030

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.