CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3385
PRO 10.0529
GLN 20.0605
ILE 30.0552
THR 40.0205
LEU 50.0230
TRP 60.0968
GLN 70.1622
ARG 80.2347
PRO 90.0455
LEU 100.0624
VAL 110.0419
THR 120.0395
ILE 130.0535
LYS 140.0519
ILE 150.0842
GLY 160.1948
GLY 170.0865
GLN 180.0544
LEU 190.0682
LYS 200.0721
GLU 210.0468
ALA 220.0276
LEU 230.0434
LEU 240.0984
ASP 250.0939
THR 260.0708
GLY 270.1173
ALA 280.0687
ASP 290.0827
ASP 300.0698
THR 310.0492
VAL 320.1131
LEU 330.0880
GLU 340.0701
GLU 350.0621
MET 360.1532
SER 370.1402
LEU 380.0990
PRO 390.3385
GLY 400.3185
ARG 410.3316
TRP 420.0801
LYS 430.0699
PRO 440.0238
LYS 450.1273
MET 460.0935
ILE 470.1645
GLY 480.1445
GLY 490.0375
ILE 500.0241
GLY 510.0447
GLY 520.1639
PHE 530.0747
ILE 540.1144
LYS 550.0970
VAL 560.1150
ARG 570.0516
GLN 580.1002
TYR 590.0702
ASP 600.0998
GLN 610.0870
ILE 620.0793
LEU 630.0318
ILE 640.0380
GLU 650.0199
ILE 660.0088
CYS 670.0700
GLY 680.1134
HIS 690.0486
LYS 700.0248
ALA 710.0367
ILE 720.0621
GLY 730.0415
THR 740.0346
VAL 750.0103
LEU 760.0904
VAL 770.0581
GLY 780.0662
PRO 790.0831
THR 800.0821
PRO 810.0996
VAL 820.1930
ASN 830.0921
ILE 840.0589
ILE 850.0870
GLY 860.0720
ARG 870.0435
ASN 880.0508
LEU 890.0390
LEU 900.0608
THR 910.0304
GLN 920.0471
ILE 930.0340
GLY 940.0195
CYS 950.0430
THR 960.0262
LEU 970.0172
ASN 980.0211
PHE 990.0091

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.