CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3159
PRO 10.0714
GLN 20.1061
ILE 30.0718
THR 40.0162
LEU 50.0648
TRP 60.0558
GLN 70.0266
ARG 80.0330
PRO 90.1318
LEU 100.1309
VAL 110.0704
THR 120.0520
ILE 130.2264
LYS 140.1884
ILE 150.1615
GLY 160.1398
GLY 170.1312
GLN 180.1350
LEU 190.2348
LYS 200.3159
GLU 210.0835
ALA 220.0782
LEU 230.0280
LEU 240.0605
ASP 250.0389
THR 260.0200
GLY 270.1699
ALA 280.0208
ASP 290.0076
ASP 300.0200
THR 310.0536
VAL 320.0927
LEU 330.0657
GLU 340.0534
GLU 350.0440
MET 360.0711
SER 370.0747
LEU 380.0480
PRO 390.1133
GLY 400.0743
ARG 410.0549
TRP 420.1290
LYS 430.0293
PRO 440.1038
LYS 450.0872
MET 460.0859
ILE 470.1381
GLY 480.0526
GLY 490.0439
ILE 500.0520
GLY 510.0591
GLY 520.1725
PHE 530.0614
ILE 540.1088
LYS 550.0613
VAL 560.0292
ARG 570.0328
GLN 580.0182
TYR 590.0225
ASP 600.1077
GLN 610.0396
ILE 620.0502
LEU 630.1419
ILE 640.2400
GLU 650.0429
ILE 660.0809
CYS 670.2100
GLY 680.0965
HIS 690.1798
LYS 700.1204
ALA 710.0670
ILE 720.0337
GLY 730.0388
THR 740.0493
VAL 750.0443
LEU 760.0343
VAL 770.0353
GLY 780.0591
PRO 790.0670
THR 800.1036
PRO 810.0576
VAL 820.0501
ASN 830.0422
ILE 840.0169
ILE 850.0329
GLY 860.0225
ARG 870.0299
ASN 880.0422
LEU 890.0752
LEU 900.0445
THR 910.1043
GLN 920.0932
ILE 930.0880
GLY 940.0777
CYS 950.1126
THR 960.1353
LEU 970.1344
ASN 980.1438
PHE 990.1320

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.