CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3542
PRO 10.0392
GLN 20.0526
ILE 30.0278
THR 40.0090
LEU 50.0211
TRP 60.0121
GLN 70.0367
ARG 80.0714
PRO 90.1107
LEU 100.1471
VAL 110.0495
THR 120.0800
ILE 130.0675
LYS 140.0529
ILE 150.0260
GLY 160.0827
GLY 170.1291
GLN 180.0293
LEU 190.0568
LYS 200.0795
GLU 210.0891
ALA 220.0467
LEU 230.0183
LEU 240.0677
ASP 250.0757
THR 260.0993
GLY 270.1724
ALA 280.0451
ASP 290.1516
ASP 300.0808
THR 310.0684
VAL 320.0344
LEU 330.0957
GLU 340.1125
GLU 350.1595
MET 360.3542
SER 370.2047
LEU 380.0781
PRO 390.1160
GLY 400.0820
ARG 410.1010
TRP 420.0566
LYS 430.2090
PRO 440.1168
LYS 450.0985
MET 460.1262
ILE 470.0843
GLY 480.0348
GLY 490.0287
ILE 500.0330
GLY 510.0674
GLY 520.1317
PHE 530.1261
ILE 540.1408
LYS 550.1139
VAL 560.0688
ARG 570.0301
GLN 580.0480
TYR 590.0303
ASP 600.1873
GLN 610.2909
ILE 620.2104
LEU 630.0403
ILE 640.1353
GLU 650.1159
ILE 660.0549
CYS 670.0835
GLY 680.1295
HIS 690.0964
LYS 700.0964
ALA 710.0877
ILE 720.0872
GLY 730.1141
THR 740.0993
VAL 750.1335
LEU 760.0389
VAL 770.0639
GLY 780.1172
PRO 790.1173
THR 800.0684
PRO 810.0453
VAL 820.1023
ASN 830.0580
ILE 840.0418
ILE 850.0328
GLY 860.0326
ARG 870.0893
ASN 880.0477
LEU 890.0286
LEU 900.0542
THR 910.0426
GLN 920.0406
ILE 930.0259
GLY 940.0456
CYS 950.0295
THR 960.0318
LEU 970.0057
ASN 980.0034
PHE 990.0055

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.