CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff8_ca  ***

<R2> analysis for 2604200934113787486

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2776
PRO 10.0368
GLN 20.0663
ILE 30.0808
THR 40.0934
LEU 50.1188
TRP 60.0931
GLN 70.0374
ARG 80.0635
PRO 90.0330
LEU 100.0838
VAL 110.1659
THR 120.0562
ILE 130.1047
LYS 140.1357
ILE 150.0831
GLY 160.0838
GLY 170.0826
GLN 180.0655
LEU 190.1644
LYS 200.1740
GLU 210.0336
ALA 220.0389
LEU 230.0973
LEU 240.2003
ASP 250.0802
THR 260.1888
GLY 270.0114
ALA 280.1945
ASP 290.2776
ASP 300.0786
THR 310.1208
VAL 320.1052
LEU 330.1001
GLU 340.0346
GLU 350.0424
MET 360.0625
SER 370.1281
LEU 380.1863
PRO 390.0918
GLY 400.0295
ARG 410.0342
TRP 420.0593
LYS 430.0954
PRO 440.0566
LYS 450.0875
MET 460.1203
ILE 470.0347
GLY 480.0574
GLY 490.0110
ILE 500.0310
GLY 510.0411
GLY 520.1210
PHE 530.0663
ILE 540.1090
LYS 550.0439
VAL 560.0680
ARG 570.0268
GLN 580.0189
TYR 590.0961
ASP 600.0505
GLN 610.0679
ILE 620.1225
LEU 630.0443
ILE 640.0516
GLU 650.0412
ILE 660.1172
CYS 670.1475
GLY 680.0826
HIS 690.0750
LYS 700.0770
ALA 710.1970
ILE 720.1832
GLY 730.1858
THR 740.1226
VAL 750.1815
LEU 760.1769
VAL 770.0677
GLY 780.0263
PRO 790.0778
THR 800.1021
PRO 810.0472
VAL 820.0722
ASN 830.0848
ILE 840.1464
ILE 850.0789
GLY 860.0544
ARG 870.0462
ASN 880.0332
LEU 890.0845
LEU 900.0896
THR 910.0838
GLN 920.0241
ILE 930.0683
GLY 940.0616
CYS 950.0891
THR 960.0339
LEU 970.0812
ASN 980.0392
PHE 990.0181

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.