CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4162
PRO 10.0438
GLN 20.0984
ILE 30.1502
THR 40.0859
LEU 50.0512
TRP 60.0533
GLN 70.0958
ARG 80.0390
PRO 90.0559
LEU 100.1348
VAL 110.1085
THR 120.0826
ILE 130.1291
LYS 140.0561
ILE 150.0403
GLY 160.2322
GLY 170.0866
GLN 180.0635
LEU 190.0512
LYS 200.0262
GLU 210.1911
ALA 220.0437
LEU 230.0521
LEU 240.0986
ASP 250.0600
THR 260.1176
GLY 270.1671
ALA 280.0543
ASP 290.1410
ASP 300.1113
THR 310.0778
VAL 320.1313
LEU 330.1277
GLU 340.1384
GLU 350.1412
MET 360.1712
SER 370.1591
LEU 380.0732
PRO 390.1022
GLY 400.0500
ARG 410.0533
TRP 420.0386
LYS 430.0591
PRO 440.0369
LYS 450.0300
MET 460.0443
ILE 470.1953
GLY 480.0865
GLY 490.0683
ILE 500.0482
GLY 510.0702
GLY 520.0273
PHE 530.0353
ILE 540.0456
LYS 550.0566
VAL 560.1145
ARG 570.0533
GLN 580.0843
TYR 590.0412
ASP 600.1189
GLN 610.1141
ILE 620.0575
LEU 630.0673
ILE 640.0283
GLU 650.0685
ILE 660.0594
CYS 670.0564
GLY 680.0658
HIS 690.0883
LYS 700.0402
ALA 710.0491
ILE 720.4162
GLY 730.0773
THR 740.0779
VAL 750.1128
LEU 760.1715
VAL 770.0739
GLY 780.0464
PRO 790.1623
THR 800.0871
PRO 810.1073
VAL 820.1299
ASN 830.0934
ILE 840.0360
ILE 850.0634
GLY 860.0241
ARG 870.0666
ASN 880.0618
LEU 890.0742
LEU 900.0445
THR 910.1203
GLN 920.0564
ILE 930.0607
GLY 940.0182
CYS 950.0493
THR 960.0281
LEU 970.1013
ASN 980.0303
PHE 990.0193

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.