CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3303
PRO 10.2401
GLN 20.0597
ILE 30.1634
THR 40.1029
LEU 50.0610
TRP 60.0268
GLN 70.0404
ARG 80.0764
PRO 90.0998
LEU 100.0424
VAL 110.0556
THR 120.0612
ILE 130.0258
LYS 140.0802
ILE 150.1124
GLY 160.0995
GLY 170.0948
GLN 180.0714
LEU 190.0645
LYS 200.1018
GLU 210.0595
ALA 220.0197
LEU 230.0431
LEU 240.0481
ASP 250.0428
THR 260.0213
GLY 270.1049
ALA 280.0132
ASP 290.0391
ASP 300.0263
THR 310.0269
VAL 320.0596
LEU 330.0532
GLU 340.0514
GLU 350.0801
MET 360.2617
SER 370.1766
LEU 380.0593
PRO 390.1999
GLY 400.1517
ARG 410.1544
TRP 420.1462
LYS 430.1972
PRO 440.0912
LYS 450.1259
MET 460.0768
ILE 470.0883
GLY 480.1622
GLY 490.1408
ILE 500.0602
GLY 510.2197
GLY 520.3303
PHE 530.0410
ILE 540.0518
LYS 550.0537
VAL 560.0587
ARG 570.0593
GLN 580.0183
TYR 590.0547
ASP 600.0748
GLN 610.0589
ILE 620.0684
LEU 630.0893
ILE 640.0946
GLU 650.0774
ILE 660.0280
CYS 670.0922
GLY 680.1029
HIS 690.1509
LYS 700.1091
ALA 710.0706
ILE 720.0533
GLY 730.0517
THR 740.0582
VAL 750.0465
LEU 760.0814
VAL 770.0674
GLY 780.0876
PRO 790.0861
THR 800.0725
PRO 810.0772
VAL 820.0521
ASN 830.0355
ILE 840.0228
ILE 850.0155
GLY 860.0168
ARG 870.0166
ASN 880.0136
LEU 890.0237
LEU 900.0206
THR 910.0437
GLN 920.0128
ILE 930.0404
GLY 940.1813
CYS 950.0519
THR 960.0786
LEU 970.1761
ASN 980.1354
PHE 990.1186

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.