CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3377
PRO 10.1496
GLN 20.0672
ILE 30.1176
THR 40.0735
LEU 50.0929
TRP 60.0775
GLN 70.0707
ARG 80.0716
PRO 90.0356
LEU 100.0908
VAL 110.0345
THR 120.0969
ILE 130.0600
LYS 140.0857
ILE 150.1688
GLY 160.0548
GLY 170.0771
GLN 180.1494
LEU 190.0666
LYS 200.0934
GLU 210.0832
ALA 220.0529
LEU 230.0789
LEU 240.0637
ASP 250.0773
THR 260.0735
GLY 270.1815
ALA 280.0476
ASP 290.0916
ASP 300.0451
THR 310.0335
VAL 320.0640
LEU 330.0862
GLU 340.0922
GLU 350.0722
MET 360.1074
SER 370.1647
LEU 380.0798
PRO 390.1730
GLY 400.1347
ARG 410.1643
TRP 420.0588
LYS 430.1430
PRO 440.0795
LYS 450.1472
MET 460.0751
ILE 470.0795
GLY 480.2119
GLY 490.1069
ILE 500.1313
GLY 510.1369
GLY 520.3377
PHE 530.2789
ILE 540.0961
LYS 550.0226
VAL 560.0589
ARG 570.0581
GLN 580.0957
TYR 590.0341
ASP 600.0310
GLN 610.0385
ILE 620.0352
LEU 630.0239
ILE 640.0459
GLU 650.0780
ILE 660.0377
CYS 670.0421
GLY 680.0460
HIS 690.0429
LYS 700.0447
ALA 710.0314
ILE 720.0172
GLY 730.0215
THR 740.0325
VAL 750.0541
LEU 760.0734
VAL 770.0762
GLY 780.1180
PRO 790.1471
THR 800.1298
PRO 810.1729
VAL 820.1232
ASN 830.0784
ILE 840.0530
ILE 850.0283
GLY 860.0368
ARG 870.0524
ASN 880.0368
LEU 890.0341
LEU 900.0475
THR 910.0310
GLN 920.0330
ILE 930.0400
GLY 940.1038
CYS 950.0936
THR 960.1023
LEU 970.0987
ASN 980.1211
PHE 990.1185

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.