CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2854
PRO 10.2645
GLN 20.1729
ILE 30.1360
THR 40.0926
LEU 50.0371
TRP 60.1457
GLN 70.1499
ARG 80.1369
PRO 90.2087
LEU 100.1522
VAL 110.0779
THR 120.0551
ILE 130.0478
LYS 140.1064
ILE 150.2102
GLY 160.1035
GLY 170.1398
GLN 180.1461
LEU 190.0652
LYS 200.0481
GLU 210.0512
ALA 220.0446
LEU 230.0318
LEU 240.0353
ASP 250.0207
THR 260.0106
GLY 270.0293
ALA 280.0239
ASP 290.0407
ASP 300.0343
THR 310.0637
VAL 320.0711
LEU 330.0523
GLU 340.0402
GLU 350.0499
MET 360.1198
SER 370.0699
LEU 380.0296
PRO 390.0496
GLY 400.0509
ARG 410.1457
TRP 420.0585
LYS 430.1797
PRO 440.1114
LYS 450.1079
MET 460.0216
ILE 470.0500
GLY 480.1437
GLY 490.0744
ILE 500.0786
GLY 510.0309
GLY 520.0377
PHE 530.0931
ILE 540.1306
LYS 550.0430
VAL 560.0483
ARG 570.0342
GLN 580.0185
TYR 590.0083
ASP 600.0614
GLN 610.0509
ILE 620.0429
LEU 630.0997
ILE 640.1139
GLU 650.0635
ILE 660.1065
CYS 670.2854
GLY 680.1913
HIS 690.1142
LYS 700.0833
ALA 710.0665
ILE 720.0551
GLY 730.0393
THR 740.0251
VAL 750.0226
LEU 760.0308
VAL 770.0452
GLY 780.0827
PRO 790.1371
THR 800.1475
PRO 810.1506
VAL 820.0855
ASN 830.0566
ILE 840.0835
ILE 850.0408
GLY 860.0416
ARG 870.0311
ASN 880.0272
LEU 890.0349
LEU 900.0250
THR 910.0314
GLN 920.0309
ILE 930.1031
GLY 940.1674
CYS 950.0607
THR 960.1820
LEU 970.1245
ASN 980.1065
PHE 990.1342

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.