CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3521
PRO 10.2013
GLN 20.0632
ILE 30.1728
THR 40.0685
LEU 50.1128
TRP 60.0713
GLN 70.0926
ARG 80.1456
PRO 90.0385
LEU 100.0891
VAL 110.0822
THR 120.0237
ILE 130.0329
LYS 140.0713
ILE 150.0537
GLY 160.0221
GLY 170.1496
GLN 180.1015
LEU 190.0719
LYS 200.0232
GLU 210.0546
ALA 220.0256
LEU 230.0223
LEU 240.1016
ASP 250.1650
THR 260.0628
GLY 270.2018
ALA 280.1004
ASP 290.1218
ASP 300.0680
THR 310.0662
VAL 320.0795
LEU 330.0499
GLU 340.0989
GLU 350.0910
MET 360.0795
SER 370.1527
LEU 380.0904
PRO 390.1451
GLY 400.1011
ARG 410.1995
TRP 420.0974
LYS 430.0634
PRO 440.1724
LYS 450.0482
MET 460.1499
ILE 470.0871
GLY 480.0684
GLY 490.0114
ILE 500.0167
GLY 510.0222
GLY 520.0676
PHE 530.3327
ILE 540.1026
LYS 550.0703
VAL 560.0511
ARG 570.0281
GLN 580.0258
TYR 590.1301
ASP 600.0791
GLN 610.1049
ILE 620.0530
LEU 630.0441
ILE 640.0482
GLU 650.0696
ILE 660.0367
CYS 670.0394
GLY 680.0085
HIS 690.0206
LYS 700.0263
ALA 710.0486
ILE 720.0242
GLY 730.0197
THR 740.0218
VAL 750.0118
LEU 760.0832
VAL 770.0136
GLY 780.0223
PRO 790.1126
THR 800.1266
PRO 810.0897
VAL 820.0553
ASN 830.0451
ILE 840.0346
ILE 850.0496
GLY 860.0394
ARG 870.0385
ASN 880.0346
LEU 890.0724
LEU 900.0867
THR 910.0431
GLN 920.0473
ILE 930.0370
GLY 940.1229
CYS 950.0459
THR 960.3521
LEU 970.2065
ASN 980.0891
PHE 990.1234

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.