CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4336
PRO 10.1328
GLN 20.1449
ILE 30.0951
THR 40.0682
LEU 50.1229
TRP 60.0598
GLN 70.0387
ARG 80.0174
PRO 90.0287
LEU 100.0312
VAL 110.0560
THR 120.0514
ILE 130.0642
LYS 140.0436
ILE 150.0510
GLY 160.0243
GLY 170.1851
GLN 180.0748
LEU 190.2768
LYS 200.0560
GLU 210.0730
ALA 220.0332
LEU 230.0148
LEU 240.0249
ASP 250.0533
THR 260.0357
GLY 270.0684
ALA 280.0952
ASP 290.1505
ASP 300.0360
THR 310.0176
VAL 320.1076
LEU 330.0632
GLU 340.0367
GLU 350.0289
MET 360.0918
SER 370.0671
LEU 380.0339
PRO 390.0401
GLY 400.0370
ARG 410.0406
TRP 420.0520
LYS 430.0177
PRO 440.1599
LYS 450.0729
MET 460.1066
ILE 470.1819
GLY 480.1513
GLY 490.0607
ILE 500.1298
GLY 510.1378
GLY 520.1229
PHE 530.4336
ILE 540.2139
LYS 550.0363
VAL 560.0974
ARG 570.0412
GLN 580.0614
TYR 590.0490
ASP 600.0756
GLN 610.0885
ILE 620.0992
LEU 630.0709
ILE 640.0870
GLU 650.0456
ILE 660.0520
CYS 670.0644
GLY 680.0384
HIS 690.0341
LYS 700.0432
ALA 710.0643
ILE 720.0458
GLY 730.0341
THR 740.0658
VAL 750.0650
LEU 760.0545
VAL 770.0603
GLY 780.0564
PRO 790.0667
THR 800.0868
PRO 810.0964
VAL 820.1978
ASN 830.0180
ILE 840.0525
ILE 850.0320
GLY 860.0623
ARG 870.0901
ASN 880.0765
LEU 890.0506
LEU 900.0969
THR 910.0668
GLN 920.0804
ILE 930.1219
GLY 940.1423
CYS 950.0484
THR 960.1928
LEU 970.1933
ASN 980.0410
PHE 990.0510

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.