CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3510
PRO 10.2379
GLN 20.1239
ILE 30.0750
THR 40.0848
LEU 50.1409
TRP 60.0791
GLN 70.0479
ARG 80.0846
PRO 90.0768
LEU 100.0335
VAL 110.0689
THR 120.0217
ILE 130.0339
LYS 140.0771
ILE 150.0771
GLY 160.0451
GLY 170.1131
GLN 180.1283
LEU 190.3510
LYS 200.0782
GLU 210.1013
ALA 220.0483
LEU 230.0508
LEU 240.0282
ASP 250.0831
THR 260.0626
GLY 270.0469
ALA 280.1101
ASP 290.2258
ASP 300.0865
THR 310.0554
VAL 320.0576
LEU 330.0440
GLU 340.0216
GLU 350.0370
MET 360.0941
SER 370.0326
LEU 380.0645
PRO 390.1184
GLY 400.0834
ARG 410.0680
TRP 420.0858
LYS 430.2150
PRO 440.2327
LYS 450.0641
MET 460.2041
ILE 470.1284
GLY 480.0948
GLY 490.0450
ILE 500.0525
GLY 510.0539
GLY 520.0672
PHE 530.0692
ILE 540.1591
LYS 550.0310
VAL 560.0179
ARG 570.0653
GLN 580.1422
TYR 590.0900
ASP 600.0449
GLN 610.0475
ILE 620.0740
LEU 630.0633
ILE 640.0920
GLU 650.0630
ILE 660.0317
CYS 670.0196
GLY 680.2046
HIS 690.0760
LYS 700.0330
ALA 710.0118
ILE 720.0364
GLY 730.0402
THR 740.0605
VAL 750.0626
LEU 760.0391
VAL 770.0368
GLY 780.0280
PRO 790.0438
THR 800.0761
PRO 810.0456
VAL 820.0682
ASN 830.0196
ILE 840.0655
ILE 850.0277
GLY 860.0380
ARG 870.1259
ASN 880.1050
LEU 890.0565
LEU 900.1250
THR 910.0801
GLN 920.0576
ILE 930.0925
GLY 940.2381
CYS 950.0776
THR 960.1217
LEU 970.1601
ASN 980.0759
PHE 990.0667

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.