CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.6543
PRO 10.1931
GLN 20.1688
ILE 30.1350
THR 40.2546
LEU 50.6543
TRP 60.2659
GLN 70.2280
ARG 80.1081
PRO 90.0724
LEU 100.0301
VAL 110.0298
THR 120.0278
ILE 130.0236
LYS 140.0553
ILE 150.0385
GLY 160.0493
GLY 170.0531
GLN 180.0340
LEU 190.1765
LYS 200.0621
GLU 210.0114
ALA 220.0102
LEU 230.0218
LEU 240.0215
ASP 250.0207
THR 260.0285
GLY 270.0122
ALA 280.0371
ASP 290.0619
ASP 300.0303
THR 310.0237
VAL 320.0255
LEU 330.0234
GLU 340.0025
GLU 350.0159
MET 360.0478
SER 370.0457
LEU 380.0230
PRO 390.1516
GLY 400.1167
ARG 410.0628
TRP 420.0223
LYS 430.0223
PRO 440.0556
LYS 450.0391
MET 460.0344
ILE 470.0205
GLY 480.0214
GLY 490.0167
ILE 500.0148
GLY 510.0061
GLY 520.0148
PHE 530.0282
ILE 540.0241
LYS 550.0105
VAL 560.0117
ARG 570.0268
GLN 580.0200
TYR 590.0203
ASP 600.0485
GLN 610.1630
ILE 620.0784
LEU 630.0372
ILE 640.0651
GLU 650.0384
ILE 660.0388
CYS 670.0289
GLY 680.1109
HIS 690.0524
LYS 700.0184
ALA 710.0579
ILE 720.0219
GLY 730.0427
THR 740.0248
VAL 750.0355
LEU 760.0219
VAL 770.0230
GLY 780.0033
PRO 790.0178
THR 800.0234
PRO 810.0397
VAL 820.0988
ASN 830.0293
ILE 840.0493
ILE 850.0087
GLY 860.0275
ARG 870.0301
ASN 880.0337
LEU 890.0411
LEU 900.0372
THR 910.0283
GLN 920.0609
ILE 930.1087
GLY 940.0776
CYS 950.0308
THR 960.1922
LEU 970.1190
ASN 980.0270
PHE 990.0409

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.