CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3833
PRO 10.1305
GLN 20.2079
ILE 30.0740
THR 40.0371
LEU 50.0498
TRP 60.1398
GLN 70.1039
ARG 80.0272
PRO 90.1265
LEU 100.0875
VAL 110.0485
THR 120.0585
ILE 130.0838
LYS 140.0889
ILE 150.3108
GLY 160.1030
GLY 170.1429
GLN 180.0912
LEU 190.1150
LYS 200.0787
GLU 210.0899
ALA 220.0778
LEU 230.0655
LEU 240.0371
ASP 250.0336
THR 260.0298
GLY 270.0500
ALA 280.0759
ASP 290.1136
ASP 300.0399
THR 310.0709
VAL 320.0784
LEU 330.0463
GLU 340.0593
GLU 350.0808
MET 360.0946
SER 370.0643
LEU 380.1185
PRO 390.0985
GLY 400.0795
ARG 410.1643
TRP 420.3833
LYS 430.1762
PRO 440.0222
LYS 450.0336
MET 460.0265
ILE 470.0225
GLY 480.0185
GLY 490.0271
ILE 500.0232
GLY 510.0125
GLY 520.0180
PHE 530.0334
ILE 540.0225
LYS 550.0160
VAL 560.0611
ARG 570.0536
GLN 580.0381
TYR 590.0504
ASP 600.0716
GLN 610.0672
ILE 620.0733
LEU 630.0668
ILE 640.0874
GLU 650.0452
ILE 660.0582
CYS 670.0873
GLY 680.1213
HIS 690.1134
LYS 700.0697
ALA 710.0601
ILE 720.0429
GLY 730.1182
THR 740.1048
VAL 750.0688
LEU 760.0436
VAL 770.0645
GLY 780.0620
PRO 790.0470
THR 800.0411
PRO 810.0331
VAL 820.0919
ASN 830.0914
ILE 840.0414
ILE 850.0554
GLY 860.0414
ARG 870.0405
ASN 880.0413
LEU 890.0473
LEU 900.0765
THR 910.1085
GLN 920.1049
ILE 930.0754
GLY 940.1228
CYS 950.0659
THR 960.2173
LEU 970.1406
ASN 980.2086
PHE 990.2246

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.