CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

CA strain for 2604200934113787487

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 0.0003
GLN 2ILE 3 -0.0003
ILE 3THR 4 -0.0000
THR 4LEU 5 0.0002
LEU 5TRP 6 0.0000
TRP 6GLN 7 0.0004
GLN 7ARG 8 0.0001
ARG 8PRO 9 -0.0004
PRO 9LEU 10 0.0004
LEU 10VAL 11 -0.0002
VAL 11THR 12 0.0001
THR 12ILE 13 -0.0001
ILE 13LYS 14 -0.0003
LYS 14ILE 15 -0.0001
ILE 15GLY 16 -0.0001
GLY 16GLY 17 -0.0003
GLY 17GLN 18 -0.0000
GLN 18LEU 19 -0.0001
LEU 19LYS 20 -0.0002
LYS 20GLU 21 -0.0001
GLU 21ALA 22 0.0003
ALA 22LEU 23 -0.0005
LEU 23LEU 24 0.0001
LEU 24ASP 25 -0.0004
ASP 25THR 26 0.0002
THR 26GLY 27 -0.0001
GLY 27ALA 28 0.0000
ALA 28ASP 29 -0.0001
ASP 29ASP 30 0.0001
ASP 30THR 31 0.0003
THR 31VAL 32 -0.0001
VAL 32LEU 33 0.0006
LEU 33GLU 34 -0.0001
GLU 34GLU 35 -0.0002
GLU 35MET 36 -0.0004
MET 36SER 37 0.0002
SER 37LEU 38 -0.0004
LEU 38PRO 39 0.0000
PRO 39GLY 40 -0.0001
GLY 40ARG 41 -0.0002
ARG 41TRP 42 0.0000
TRP 42LYS 43 -0.0002
LYS 43PRO 44 -0.0000
PRO 44LYS 45 -0.0001
LYS 45MET 46 0.0001
MET 46ILE 47 0.0002
ILE 47GLY 48 0.0002
GLY 48GLY 49 0.0001
GLY 49ILE 50 -0.0002
ILE 50GLY 51 0.0005
GLY 51GLY 52 0.0004
GLY 52PHE 53 -0.0005
PHE 53ILE 54 0.0001
ILE 54LYS 55 -0.0003
LYS 55VAL 56 0.0002
VAL 56ARG 57 -0.0000
ARG 57GLN 58 -0.0003
GLN 58TYR 59 -0.0002
TYR 59ASP 60 0.0002
ASP 60GLN 61 -0.0001
GLN 61ILE 62 -0.0001
ILE 62LEU 63 0.0002
LEU 63ILE 64 -0.0000
ILE 64GLU 65 -0.0000
GLU 65ILE 66 -0.0002
ILE 66CYS 67 0.0003
CYS 67GLY 68 0.0003
GLY 68HIS 69 0.0001
HIS 69LYS 70 -0.0002
LYS 70ALA 71 0.0001
ALA 71ILE 72 -0.0001
ILE 72GLY 73 0.0001
GLY 73THR 74 -0.0000
THR 74VAL 75 -0.0003
VAL 75LEU 76 0.0002
LEU 76VAL 77 0.0002
VAL 77GLY 78 0.0000
GLY 78PRO 79 -0.0003
PRO 79THR 80 0.0002
THR 80PRO 81 0.0001
PRO 81VAL 82 0.0004
VAL 82ASN 83 -0.0004
ASN 83ILE 84 -0.0001
ILE 84ILE 85 0.0004
ILE 85GLY 86 -0.0001
GLY 86ARG 87 -0.0002
ARG 87ASN 88 -0.0002
ASN 88LEU 89 0.0001
LEU 89LEU 90 -0.0004
LEU 90THR 91 -0.0001
THR 91GLN 92 0.0005
GLN 92ILE 93 0.0000
ILE 93GLY 94 -0.0000
GLY 94CYS 95 0.0001
CYS 95THR 96 -0.0001
THR 96LEU 97 0.0001
LEU 97ASN 98 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.