CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_closed_cutoff10_ca  ***

<R2> analysis for 2604200934113787487

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2378
PRO 10.0751
GLN 20.0836
ILE 30.0513
THR 40.0390
LEU 50.1862
TRP 60.2378
GLN 70.0817
ARG 80.1725
PRO 90.2226
LEU 100.1836
VAL 110.2194
THR 120.0322
ILE 130.0324
LYS 140.0773
ILE 150.0589
GLY 160.0454
GLY 170.0399
GLN 180.0604
LEU 190.0766
LYS 200.1713
GLU 210.0952
ALA 220.0667
LEU 230.0605
LEU 240.0385
ASP 250.0815
THR 260.0807
GLY 270.0727
ALA 280.1173
ASP 290.0807
ASP 300.0739
THR 310.0832
VAL 320.0662
LEU 330.0602
GLU 340.0428
GLU 350.0640
MET 360.0923
SER 370.1197
LEU 380.0551
PRO 390.0880
GLY 400.1347
ARG 410.1241
TRP 420.1266
LYS 430.1513
PRO 440.1137
LYS 450.0898
MET 460.0905
ILE 470.1746
GLY 480.0692
GLY 490.0574
ILE 500.0186
GLY 510.0380
GLY 520.0361
PHE 530.1197
ILE 540.2119
LYS 550.0551
VAL 560.0830
ARG 570.1204
GLN 580.0611
TYR 590.1077
ASP 600.0816
GLN 610.1784
ILE 620.0605
LEU 630.0398
ILE 640.1671
GLU 650.0514
ILE 660.0437
CYS 670.0408
GLY 680.1385
HIS 690.0654
LYS 700.0613
ALA 710.1265
ILE 720.0797
GLY 730.1578
THR 740.0922
VAL 750.0964
LEU 760.0441
VAL 770.0558
GLY 780.0683
PRO 790.0578
THR 800.0948
PRO 810.0525
VAL 820.0400
ASN 830.0361
ILE 840.1101
ILE 850.1033
GLY 860.0797
ARG 870.0375
ASN 880.0217
LEU 890.0518
LEU 900.1020
THR 910.1745
GLN 920.0881
ILE 930.0650
GLY 940.1091
CYS 950.0761
THR 960.0699
LEU 970.0437
ASN 980.0224
PHE 990.0332

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.