CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  c_hıv_test  ***

CA strain for 2604201115453819784

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0012
GLN 2ILE 3 0.0025
ILE 3THR 4 0.0037
THR 4LEU 5 -0.0017
LEU 5TRP 6 0.0045
TRP 6GLN 7 0.0042
GLN 7ARG 8 -0.0028
ARG 8PRO 9 0.0319
PRO 9LEU 10 -0.0066
LEU 10VAL 11 -0.0072
VAL 11THR 12 0.0107
THR 12ILE 13 -0.0017
ILE 13LYS 14 0.0003
LYS 14ILE 15 0.0003
ILE 15GLY 16 0.0004
GLY 16GLY 17 0.0027
GLY 17GLN 18 -0.0012
GLN 18LEU 19 0.0014
LEU 19LYS 20 0.0002
LYS 20GLU 21 -0.0038
GLU 21ALA 22 0.0018
ALA 22LEU 23 -0.0046
LEU 23LEU 24 -0.0022
LEU 24ASP 25 -0.0029
ASP 25THR 26 0.0021
THR 26GLY 27 0.0015
GLY 27ALA 28 -0.0002
ALA 28ASP 29 -0.0005
ASP 29ASP 30 -0.0029
ASP 30THR 31 0.0059
THR 31VAL 32 0.0004
VAL 32LEU 33 0.0043
LEU 33GLU 34 -0.0037
GLU 34GLU 35 0.0011
GLU 35MET 36 0.0036
MET 36SER 37 -0.0012
SER 37LEU 38 0.0055
LEU 38PRO 39 0.0058
PRO 39GLY 40 -0.0131
GLY 40ARG 41 -0.0207
ARG 41TRP 42 -0.0019
TRP 42LYS 43 -0.0260
LYS 43PRO 44 0.0712
PRO 44LYS 45 -0.0643
LYS 45MET 46 -0.0720
MET 46ILE 47 0.0111
ILE 47GLY 48 -0.0330
GLY 48GLY 49 0.0094
GLY 49ILE 50 -0.0006
ILE 50GLY 51 -0.0021
GLY 51GLY 52 -0.0099
GLY 52PHE 53 0.0128
PHE 53ILE 54 -0.0376
ILE 54LYS 55 0.0438
LYS 55VAL 56 -0.0465
VAL 56ARG 57 -0.0492
ARG 57GLN 58 -0.0019
GLN 58TYR 59 -0.0243
TYR 59ASP 60 -0.0085
ASP 60GLN 61 -0.0023
GLN 61ILE 62 -0.0088
ILE 62LEU 63 0.0030
LEU 63ILE 64 0.0009
ILE 64GLU 65 0.0037
GLU 65ILE 66 -0.0008
ILE 66CYS 67 -0.0014
CYS 67GLY 68 0.0007
GLY 68HIS 69 -0.0036
HIS 69LYS 70 -0.0004
LYS 70ALA 71 -0.0018
ALA 71ILE 72 0.0022
ILE 72GLY 73 -0.0019
GLY 73THR 74 -0.0086
THR 74VAL 75 0.0118
VAL 75LEU 76 -0.0446
LEU 76VAL 77 -0.0204
VAL 77GLY 78 -0.0018
GLY 78PRO 79 -0.0057
PRO 79THR 80 0.0012
THR 80PRO 81 -0.0000
PRO 81VAL 82 0.0000
VAL 82ASN 83 0.0009
ASN 83ILE 84 0.0055
ILE 84ILE 85 0.0061
ILE 85GLY 86 -0.0006
GLY 86ARG 87 -0.0009
ARG 87ASN 88 0.0025
ASN 88LEU 89 -0.0016
LEU 89LEU 90 0.0047
LEU 90THR 91 0.0042
THR 91GLN 92 0.0017
GLN 92ILE 93 -0.0040
ILE 93GLY 94 0.0014
GLY 94CYS 95 -0.0014
CYS 95THR 96 -0.0021
THR 96LEU 97 0.0019
LEU 97ASN 98 -0.0005

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.