CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  c_hıv_10_test  ***

CA strain for 2604201126423830431

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 0.4138
GLN 2ILE 3 0.2729
ILE 3THR 4 -0.0098
THR 4LEU 5 0.1727
LEU 5TRP 6 -0.1295
TRP 6GLN 7 0.1480
GLN 7ARG 8 -0.1789
ARG 8PRO 9 0.0083
PRO 9LEU 10 -0.0047
LEU 10VAL 11 0.0103
VAL 11THR 12 0.0296
THR 12ILE 13 -0.0196
ILE 13LYS 14 -0.0319
LYS 14ILE 15 -0.0466
ILE 15GLY 16 -0.0304
GLY 16GLY 17 -0.0237
GLY 17GLN 18 0.0171
GLN 18LEU 19 0.0040
LEU 19LYS 20 -0.1150
LYS 20GLU 21 0.0193
GLU 21ALA 22 0.0141
ALA 22LEU 23 -0.0366
LEU 23LEU 24 0.0838
LEU 24ASP 25 -0.0311
ASP 25THR 26 0.0359
THR 26GLY 27 0.0647
GLY 27ALA 28 0.0821
ALA 28ASP 29 -0.0372
ASP 29ASP 30 0.0681
ASP 30THR 31 -0.0441
THR 31VAL 32 0.0377
VAL 32LEU 33 0.1088
LEU 33GLU 34 -0.0318
GLU 34GLU 35 -0.1482
GLU 35MET 36 -0.1915
MET 36SER 37 -0.0432
SER 37LEU 38 -0.1001
LEU 38PRO 39 0.0277
PRO 39GLY 40 0.0328
GLY 40ARG 41 -0.0206
ARG 41TRP 42 0.0424
TRP 42LYS 43 -0.0958
LYS 43PRO 44 0.0324
PRO 44LYS 45 0.0454
LYS 45MET 46 -0.0918
MET 46ILE 47 0.1603
ILE 47GLY 48 -0.2890
GLY 48GLY 49 -0.2873
GLY 49ILE 50 -0.0522
ILE 50GLY 51 -0.0006
GLY 51GLY 52 -0.1907
GLY 52PHE 53 -0.0440
PHE 53ILE 54 -0.0230
ILE 54LYS 55 0.1294
LYS 55VAL 56 0.0559
VAL 56ARG 57 0.1094
ARG 57GLN 58 0.0398
GLN 58TYR 59 0.0056
TYR 59ASP 60 0.0765
ASP 60GLN 61 0.0270
GLN 61ILE 62 0.1594
ILE 62LEU 63 -0.1496
LEU 63ILE 64 0.0301
ILE 64GLU 65 0.0542
GLU 65ILE 66 -0.0469
ILE 66CYS 67 -0.0038
CYS 67GLY 68 0.0559
GLY 68HIS 69 0.0040
HIS 69LYS 70 -0.0012
LYS 70ALA 71 -0.0221
ALA 71ILE 72 -0.0130
ILE 72GLY 73 0.0508
GLY 73THR 74 0.0029
THR 74VAL 75 -0.0604
VAL 75LEU 76 -0.0203
LEU 76VAL 77 0.0147
VAL 77GLY 78 0.0553
GLY 78PRO 79 -0.0027
PRO 79THR 80 -0.0115
THR 80PRO 81 0.0738
PRO 81VAL 82 -0.0080
VAL 82ASN 83 -0.0184
ASN 83ILE 84 -0.0450
ILE 84ILE 85 0.0143
ILE 85GLY 86 -0.0024
GLY 86ARG 87 0.0070
ARG 87ASN 88 -0.0666
ASN 88LEU 89 0.0000
LEU 89LEU 90 -0.0246
LEU 90THR 91 0.0924
THR 91GLN 92 -0.0418
GLN 92ILE 93 0.0222
ILE 93GLY 94 -0.0180
GLY 94CYS 95 0.0482
CYS 95THR 96 0.1167
THR 96LEU 97 -0.2609
LEU 97ASN 98 0.3756

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.