CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.5325
MET 10.0333
GLN 20.0130
ILE 30.0026
PHE 40.0113
VAL 50.0129
LYS 60.0140
THR 70.0228
LEU 80.0368
THR 90.0367
GLY 100.0640
LYS 110.0378
THR 120.0167
ILE 130.0316
THR 140.0150
LEU 150.0169
GLU 160.0280
VAL 170.0205
GLU 180.0166
PRO 190.0235
SER 200.0324
ASP 210.0024
THR 220.0195
ILE 230.0029
GLU 240.0172
ASN 250.0249
VAL 260.0113
LYS 270.0082
ALA 280.0122
LYS 290.0188
ILE 300.0078
GLN 310.0072
ASP 320.0130
LYS 330.0093
GLU 340.0045
GLY 350.0342
ILE 360.0052
PRO 370.0140
PRO 380.0131
ASP 390.0078
GLN 400.0101
GLN 410.0064
ARG 420.0096
LEU 430.0050
ILE 440.0178
PHE 450.0190
ALA 460.0810
GLY 470.5325
LYS 480.0372
GLN 490.0176
LEU 500.0169
GLU 510.0299
ASP 520.0210
GLY 530.0139
ARG 540.0086
THR 550.0155
LEU 560.0092
SER 570.0222
ASP 580.0111
TYR 590.0101
ASN 600.0514
ILE 610.0192
GLN 620.0258
LYS 630.0281
GLU 640.0127
SER 650.0063
THR 660.0082
LEU 670.0078
HIS 680.0154
LEU 690.0087
VAL 700.0083
LEU 710.0109
ARG 720.0098
LEU 730.0200
ARG 740.0071
GLY 750.0087
GLY 760.0085

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.