CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1501
MET 10.0344
GLN 20.0146
ILE 30.0129
PHE 40.0125
VAL 50.0134
LYS 60.0234
THR 70.0323
LEU 80.0353
THR 90.0389
GLY 100.0260
LYS 110.0158
THR 120.0206
ILE 130.0196
THR 140.0182
LEU 150.0122
GLU 160.0335
VAL 170.0203
GLU 180.0195
PRO 190.0134
SER 200.0185
ASP 210.0306
THR 220.0420
ILE 230.0279
GLU 240.0154
ASN 250.0356
VAL 260.0319
LYS 270.0231
ALA 280.0222
LYS 290.0251
ILE 300.0195
GLN 310.0144
ASP 320.0282
LYS 330.0150
GLU 340.0077
GLY 350.0145
ILE 360.0167
PRO 370.0238
PRO 380.0177
ASP 390.0444
GLN 400.0200
GLN 410.0132
ARG 420.0279
LEU 430.0313
ILE 440.0215
PHE 450.0221
ALA 460.0920
GLY 470.0994
LYS 480.0281
GLN 490.0413
LEU 500.0382
GLU 510.0322
ASP 520.0220
GLY 530.0053
ARG 540.0187
THR 550.0222
LEU 560.0117
SER 570.0050
ASP 580.0128
TYR 590.0181
ASN 600.0040
ILE 610.0143
GLN 620.0291
LYS 630.0325
GLU 640.0198
SER 650.0240
THR 660.0125
LEU 670.0090
HIS 680.0183
LEU 690.0240
VAL 700.0282
LEU 710.0095
ARG 720.0422
LEU 730.0460
ARG 740.0454
GLY 750.1501
GLY 760.1271

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.