CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0770
MET 10.0115
GLN 20.0081
ILE 30.0120
PHE 40.0125
VAL 50.0187
LYS 60.0249
THR 70.0322
LEU 80.0396
THR 90.0276
GLY 100.0300
LYS 110.0212
THR 120.0094
ILE 130.0154
THR 140.0161
LEU 150.0043
GLU 160.0148
VAL 170.0243
GLU 180.0364
PRO 190.0337
SER 200.0697
ASP 210.0310
THR 220.0234
ILE 230.0239
GLU 240.0113
ASN 250.0225
VAL 260.0138
LYS 270.0155
ALA 280.0183
LYS 290.0129
ILE 300.0135
GLN 310.0135
ASP 320.0131
LYS 330.0173
GLU 340.0284
GLY 350.0248
ILE 360.0147
PRO 370.0137
PRO 380.0112
ASP 390.0199
GLN 400.0143
GLN 410.0087
ARG 420.0214
LEU 430.0239
ILE 440.0198
PHE 450.0233
ALA 460.0309
GLY 470.0357
LYS 480.0322
GLN 490.0304
LEU 500.0497
GLU 510.0650
ASP 520.0431
GLY 530.0770
ARG 540.0415
THR 550.0096
LEU 560.0218
SER 570.0339
ASP 580.0494
TYR 590.0035
ASN 600.0231
ILE 610.0160
GLN 620.0231
LYS 630.0333
GLU 640.0224
SER 650.0222
THR 660.0218
LEU 670.0200
HIS 680.0253
LEU 690.0208
VAL 700.0439
LEU 710.0227
ARG 720.0209
LEU 730.0329
ARG 740.0383
GLY 750.0464
GLY 760.0503

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.