CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0777
MET 10.0210
GLN 20.0143
ILE 30.0116
PHE 40.0144
VAL 50.0095
LYS 60.0170
THR 70.0430
LEU 80.0273
THR 90.0694
GLY 100.0420
LYS 110.0289
THR 120.0128
ILE 130.0147
THR 140.0209
LEU 150.0202
GLU 160.0074
VAL 170.0102
GLU 180.0299
PRO 190.0295
SER 200.0415
ASP 210.0433
THR 220.0434
ILE 230.0286
GLU 240.0333
ASN 250.0356
VAL 260.0177
LYS 270.0229
ALA 280.0353
LYS 290.0378
ILE 300.0219
GLN 310.0165
ASP 320.0227
LYS 330.0165
GLU 340.0261
GLY 350.0239
ILE 360.0075
PRO 370.0180
PRO 380.0241
ASP 390.0435
GLN 400.0164
GLN 410.0181
ARG 420.0145
LEU 430.0245
ILE 440.0287
PHE 450.0413
ALA 460.0727
GLY 470.0777
LYS 480.0244
GLN 490.0253
LEU 500.0244
GLU 510.0308
ASP 520.0372
GLY 530.0301
ARG 540.0136
THR 550.0228
LEU 560.0195
SER 570.0142
ASP 580.0317
TYR 590.0183
ASN 600.0215
ILE 610.0213
GLN 620.0399
LYS 630.0346
GLU 640.0198
SER 650.0236
THR 660.0270
LEU 670.0186
HIS 680.0238
LEU 690.0301
VAL 700.0304
LEU 710.0116
ARG 720.0303
LEU 730.0287
ARG 740.0474
GLY 750.0358
GLY 760.0698

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.