CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0779
MET 10.0144
GLN 20.0278
ILE 30.0190
PHE 40.0249
VAL 50.0138
LYS 60.0165
THR 70.0282
LEU 80.0534
THR 90.0500
GLY 100.0576
LYS 110.0235
THR 120.0184
ILE 130.0124
THR 140.0058
LEU 150.0179
GLU 160.0237
VAL 170.0216
GLU 180.0351
PRO 190.0477
SER 200.0528
ASP 210.0388
THR 220.0210
ILE 230.0232
GLU 240.0199
ASN 250.0166
VAL 260.0059
LYS 270.0143
ALA 280.0259
LYS 290.0210
ILE 300.0218
GLN 310.0296
ASP 320.0074
LYS 330.0197
GLU 340.0272
GLY 350.0404
ILE 360.0371
PRO 370.0448
PRO 380.0301
ASP 390.0246
GLN 400.0087
GLN 410.0099
ARG 420.0070
LEU 430.0084
ILE 440.0065
PHE 450.0187
ALA 460.0325
GLY 470.0287
LYS 480.0206
GLN 490.0150
LEU 500.0216
GLU 510.0252
ASP 520.0389
GLY 530.0232
ARG 540.0181
THR 550.0401
LEU 560.0343
SER 570.0213
ASP 580.0141
TYR 590.0213
ASN 600.0779
ILE 610.0669
GLN 620.0710
LYS 630.0415
GLU 640.0373
SER 650.0378
THR 660.0248
LEU 670.0085
HIS 680.0115
LEU 690.0175
VAL 700.0219
LEU 710.0101
ARG 720.0175
LEU 730.0190
ARG 740.0392
GLY 750.0659
GLY 760.0418

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.