CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0759
MET 10.0074
GLN 20.0186
ILE 30.0097
PHE 40.0159
VAL 50.0170
LYS 60.0163
THR 70.0291
LEU 80.0166
THR 90.0742
GLY 100.0759
LYS 110.0170
THR 120.0291
ILE 130.0307
THR 140.0262
LEU 150.0140
GLU 160.0185
VAL 170.0084
GLU 180.0082
PRO 190.0092
SER 200.0204
ASP 210.0140
THR 220.0249
ILE 230.0174
GLU 240.0178
ASN 250.0131
VAL 260.0093
LYS 270.0107
ALA 280.0165
LYS 290.0278
ILE 300.0176
GLN 310.0211
ASP 320.0306
LYS 330.0170
GLU 340.0226
GLY 350.0245
ILE 360.0298
PRO 370.0331
PRO 380.0047
ASP 390.0201
GLN 400.0066
GLN 410.0241
ARG 420.0209
LEU 430.0114
ILE 440.0130
PHE 450.0213
ALA 460.0279
GLY 470.0265
LYS 480.0130
GLN 490.0145
LEU 500.0063
GLU 510.0132
ASP 520.0181
GLY 530.0157
ARG 540.0129
THR 550.0099
LEU 560.0056
SER 570.0091
ASP 580.0192
TYR 590.0118
ASN 600.0082
ILE 610.0113
GLN 620.0240
LYS 630.0163
GLU 640.0327
SER 650.0164
THR 660.0172
LEU 670.0052
HIS 680.0098
LEU 690.0096
VAL 700.0292
LEU 710.0308
ARG 720.0123
LEU 730.0417
ARG 740.0324
GLY 750.0478
GLY 760.0180

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.