CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1377
MET 10.0104
GLN 20.0129
ILE 30.0116
PHE 40.0124
VAL 50.0101
LYS 60.0096
THR 70.0380
LEU 80.0208
THR 90.0534
GLY 100.0596
LYS 110.0061
THR 120.0200
ILE 130.0167
THR 140.0105
LEU 150.0136
GLU 160.0185
VAL 170.0213
GLU 180.0197
PRO 190.0227
SER 200.0473
ASP 210.0245
THR 220.0330
ILE 230.0207
GLU 240.0240
ASN 250.0203
VAL 260.0172
LYS 270.0204
ALA 280.0362
LYS 290.0448
ILE 300.0269
GLN 310.0251
ASP 320.0547
LYS 330.0507
GLU 340.0422
GLY 350.0464
ILE 360.0269
PRO 370.0193
PRO 380.0201
ASP 390.0647
GLN 400.0344
GLN 410.0118
ARG 420.0138
LEU 430.0137
ILE 440.0229
PHE 450.0306
ALA 460.0354
GLY 470.0520
LYS 480.0180
GLN 490.0181
LEU 500.0073
GLU 510.0120
ASP 520.0212
GLY 530.0288
ARG 540.0145
THR 550.0148
LEU 560.0160
SER 570.0252
ASP 580.0361
TYR 590.0260
ASN 600.0256
ILE 610.0087
GLN 620.0267
LYS 630.0307
GLU 640.0255
SER 650.0229
THR 660.0072
LEU 670.0096
HIS 680.0103
LEU 690.0113
VAL 700.0138
LEU 710.0110
ARG 720.0371
LEU 730.0378
ARG 740.0461
GLY 750.1211
GLY 760.1377

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.