CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0832
MET 10.0142
GLN 20.0145
ILE 30.0152
PHE 40.0122
VAL 50.0126
LYS 60.0137
THR 70.0160
LEU 80.0233
THR 90.0233
GLY 100.0584
LYS 110.0154
THR 120.0103
ILE 130.0126
THR 140.0089
LEU 150.0062
GLU 160.0143
VAL 170.0188
GLU 180.0298
PRO 190.0471
SER 200.0501
ASP 210.0173
THR 220.0268
ILE 230.0273
GLU 240.0385
ASN 250.0146
VAL 260.0109
LYS 270.0124
ALA 280.0190
LYS 290.0163
ILE 300.0257
GLN 310.0256
ASP 320.0330
LYS 330.0282
GLU 340.0405
GLY 350.0315
ILE 360.0112
PRO 370.0199
PRO 380.0113
ASP 390.0383
GLN 400.0186
GLN 410.0133
ARG 420.0229
LEU 430.0174
ILE 440.0264
PHE 450.0222
ALA 460.0239
GLY 470.0648
LYS 480.0266
GLN 490.0156
LEU 500.0137
GLU 510.0370
ASP 520.0472
GLY 530.0578
ARG 540.0223
THR 550.0157
LEU 560.0224
SER 570.0508
ASP 580.0832
TYR 590.0525
ASN 600.0755
ILE 610.0276
GLN 620.0294
LYS 630.0128
GLU 640.0185
SER 650.0168
THR 660.0246
LEU 670.0223
HIS 680.0228
LEU 690.0101
VAL 700.0056
LEU 710.0162
ARG 720.0179
LEU 730.0063
ARG 740.0415
GLY 750.0395
GLY 760.0135

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.