CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1046
MET 10.0054
GLN 20.0093
ILE 30.0159
PHE 40.0199
VAL 50.0321
LYS 60.0493
THR 70.0376
LEU 80.0317
THR 90.0554
GLY 100.0681
LYS 110.0619
THR 120.0667
ILE 130.0408
THR 140.0298
LEU 150.0201
GLU 160.0202
VAL 170.0140
GLU 180.0308
PRO 190.0085
SER 200.0192
ASP 210.0096
THR 220.0060
ILE 230.0117
GLU 240.0201
ASN 250.0192
VAL 260.0077
LYS 270.0054
ALA 280.0221
LYS 290.0350
ILE 300.0213
GLN 310.0264
ASP 320.0469
LYS 330.0159
GLU 340.0208
GLY 350.0120
ILE 360.0128
PRO 370.0268
PRO 380.0105
ASP 390.0123
GLN 400.0206
GLN 410.0180
ARG 420.0246
LEU 430.0053
ILE 440.0175
PHE 450.0223
ALA 460.0573
GLY 470.1046
LYS 480.0392
GLN 490.0259
LEU 500.0099
GLU 510.0323
ASP 520.0241
GLY 530.0394
ARG 540.0563
THR 550.0259
LEU 560.0102
SER 570.0248
ASP 580.0387
TYR 590.0222
ASN 600.0168
ILE 610.0274
GLN 620.0583
LYS 630.0267
GLU 640.0161
SER 650.0229
THR 660.0180
LEU 670.0166
HIS 680.0188
LEU 690.0056
VAL 700.0202
LEU 710.0500
ARG 720.0684
LEU 730.0448
ARG 740.0448
GLY 750.0504
GLY 760.0760

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.