CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CHROMOSOMAL PROTEIN 02-JAN-87 1UBQ  ***

<R2> analysis for 2604201608233908857

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1794
MET 10.0317
GLN 20.0207
ILE 30.0118
PHE 40.0245
VAL 50.0101
LYS 60.0130
THR 70.0358
LEU 80.0182
THR 90.0116
GLY 100.0341
LYS 110.0618
THR 120.0246
ILE 130.0100
THR 140.0433
LEU 150.0409
GLU 160.0367
VAL 170.0157
GLU 180.0237
PRO 190.0438
SER 200.0349
ASP 210.0465
THR 220.0227
ILE 230.0121
GLU 240.0132
ASN 250.0212
VAL 260.0091
LYS 270.0218
ALA 280.0305
LYS 290.0191
ILE 300.0152
GLN 310.0324
ASP 320.0377
LYS 330.0186
GLU 340.0106
GLY 350.0527
ILE 360.0079
PRO 370.0265
PRO 380.0329
ASP 390.0236
GLN 400.0119
GLN 410.0110
ARG 420.0040
LEU 430.0123
ILE 440.0061
PHE 450.0225
ALA 460.0157
GLY 470.1794
LYS 480.0518
GLN 490.0250
LEU 500.0181
GLU 510.0434
ASP 520.0249
GLY 530.0511
ARG 540.0144
THR 550.0156
LEU 560.0133
SER 570.0515
ASP 580.0036
TYR 590.0436
ASN 600.1232
ILE 610.0260
GLN 620.0486
LYS 630.0318
GLU 640.0206
SER 650.0458
THR 660.0203
LEU 670.0402
HIS 680.0462
LEU 690.0156
VAL 700.0180
LEU 710.0277
ARG 720.0404
LEU 730.0142
ARG 740.0215
GLY 750.0202
GLY 760.0366

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.