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***  tRNACUG  ***

Normal Mode Analysis for ID 2605121351492136673

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4515
mode 8 1.61 0.3856
mode 9 2.02 0.6175
mode 10 2.36 0.4488
mode 11 2.66 0.5824
mode 12 2.86 0.5064
mode 13 3.83 0.5907
mode 14 4.14 0.3624
mode 15 4.86 0.2704
mode 16 5.21 0.3958
mode 17 5.82 0.6738
mode 18 6.41 0.6756
mode 19 7.06 0.3363
mode 20 7.64 0.2864
mode 21 8.11 0.5010
mode 22 8.32 0.3259
mode 23 9.19 0.6406
mode 24 9.86 0.5653
mode 25 10.59 0.6349
mode 26 10.92 0.5763
mode 27 11.88 0.6001
mode 28 12.16 0.3585
mode 29 12.61 0.5990
mode 30 13.29 0.5667
mode 31 13.65 0.6587
mode 32 14.07 0.4034
mode 33 14.49 0.5080
mode 34 15.19 0.5752
mode 35 15.46 0.6105
mode 36 15.71 0.3995
mode 37 16.15 0.1741
mode 38 16.22 0.4630
mode 39 16.68 0.5325
mode 40 16.94 0.3433
mode 41 17.45 0.4761
mode 42 17.76 0.4622
mode 43 18.39 0.4288
mode 44 18.60 0.4899
mode 45 19.24 0.4753
mode 46 19.68 0.5064
mode 47 19.91 0.5219
mode 48 20.03 0.3641
mode 49 20.17 0.5279
mode 50 20.34 0.4862
mode 51 20.59 0.4653
mode 52 20.75 0.3306
mode 53 21.08 0.3171
mode 54 21.31 0.4453
mode 55 21.48 0.4670
mode 56 21.84 0.5837
mode 57 21.99 0.4020
mode 58 22.36 0.4879
mode 59 22.46 0.4034
mode 60 22.77 0.3163
mode 61 23.05 0.4357
mode 62 23.30 0.3525
mode 63 23.58 0.4867
mode 64 24.01 0.4696
mode 65 24.09 0.4053
mode 66 24.13 0.3445
mode 67 24.40 0.4726
mode 68 24.74 0.5137
mode 69 25.01 0.4686
mode 70 25.36 0.5722
mode 71 25.53 0.3315
mode 72 25.82 0.3534
mode 73 26.06 0.4457
mode 74 26.34 0.4539
mode 75 26.43 0.4030
mode 76 26.53 0.5350
mode 77 26.79 0.3831
mode 78 27.11 0.4970
mode 79 27.23 0.3488
mode 80 27.32 0.5002
mode 81 27.73 0.3869
mode 82 27.81 0.6214
mode 83 27.96 0.4506
mode 84 28.04 0.5437
mode 85 28.14 0.4566
mode 86 28.50 0.2674
mode 87 28.57 0.4270
mode 88 28.72 0.4845
mode 89 29.00 0.3653
mode 90 29.17 0.4731
mode 91 29.76 0.5527
mode 92 29.80 0.5935
mode 93 30.17 0.2524
mode 94 30.32 0.4174
mode 95 30.41 0.3546
mode 96 30.66 0.5254
mode 97 30.79 0.5864
mode 98 30.89 0.3037
mode 99 31.13 0.3794
mode 100 31.40 0.5646
mode 101 31.64 0.4043
mode 102 31.86 0.4382
mode 103 31.93 0.5160
mode 104 32.03 0.5020
mode 105 32.30 0.4655
mode 106 32.57 0.3407

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.