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***  LRRK2_WT  ***

Normal Mode Analysis for ID 2605160850333024550

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5307
mode 8 1.19 0.4016
mode 9 1.55 0.5027
mode 10 1.63 0.3567
mode 11 1.87 0.4358
mode 12 2.21 0.6726
mode 13 2.71 0.2552
mode 14 2.78 0.6458
mode 15 3.35 0.5964
mode 16 3.61 0.6319
mode 17 3.88 0.2853
mode 18 4.06 0.5411
mode 19 4.13 0.6715
mode 20 4.46 0.6639
mode 21 4.69 0.4483
mode 22 4.83 0.6450
mode 23 5.09 0.3667
mode 24 5.30 0.5145
mode 25 5.37 0.4895
mode 26 5.54 0.2571
mode 27 5.74 0.5364
mode 28 5.92 0.0854
mode 29 6.07 0.3698
mode 30 6.22 0.3194
mode 31 6.33 0.3698
mode 32 6.57 0.0975
mode 33 6.73 0.2007
mode 34 6.82 0.4958
mode 35 7.02 0.2791
mode 36 7.14 0.3476
mode 37 7.23 0.2913
mode 38 7.28 0.3181
mode 39 7.43 0.3534
mode 40 7.69 0.2362
mode 41 7.73 0.0571
mode 42 7.83 0.3066
mode 43 7.98 0.2060
mode 44 8.07 0.4313
mode 45 8.23 0.3833
mode 46 8.32 0.2505
mode 47 8.53 0.3092
mode 48 8.68 0.3379
mode 49 8.72 0.3797
mode 50 8.76 0.4196
mode 51 8.93 0.4837
mode 52 9.06 0.3933
mode 53 9.17 0.3139
mode 54 9.30 0.3295
mode 55 9.42 0.3806
mode 56 9.53 0.4426
mode 57 9.59 0.3665
mode 58 9.71 0.3688
mode 59 10.01 0.3553
mode 60 10.24 0.5145
mode 61 10.34 0.3752
mode 62 10.35 0.3383
mode 63 10.46 0.0861
mode 64 10.55 0.4410
mode 65 10.62 0.1083
mode 66 10.74 0.3586
mode 67 10.82 0.3409
mode 68 10.93 0.1559
mode 69 10.99 0.3321
mode 70 11.10 0.3623
mode 71 11.20 0.4245
mode 72 11.47 0.2701
mode 73 11.56 0.4958
mode 74 11.58 0.4033
mode 75 11.78 0.4462
mode 76 11.87 0.4283
mode 77 12.10 0.4186
mode 78 12.17 0.3777
mode 79 12.26 0.4864
mode 80 12.45 0.3760
mode 81 12.56 0.3784
mode 82 12.60 0.2926
mode 83 12.63 0.0439
mode 84 12.73 0.2301
mode 85 12.77 0.0972
mode 86 12.90 0.3680
mode 87 12.97 0.3997
mode 88 13.05 0.3530
mode 89 13.19 0.3010
mode 90 13.24 0.1276
mode 91 13.29 0.2105
mode 92 13.39 0.2774
mode 93 13.52 0.3126
mode 94 13.59 0.2503
mode 95 13.70 0.2910
mode 96 13.82 0.1472
mode 97 13.85 0.4172
mode 98 13.93 0.4061
mode 99 14.00 0.3719
mode 100 14.04 0.3497
mode 101 14.20 0.4134
mode 102 14.33 0.5070
mode 103 14.44 0.2487
mode 104 14.54 0.4125
mode 105 14.63 0.5235
mode 106 14.66 0.3233

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.