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LOGs for ID: 2606031225422592978

Output from eigenvector calculation:


STDOUT:
CUTOFF set to default value (CUTOFF=8) Build Tirion matrix: Pdbmat> Computes the Hessian matrix, using an Elastic Network Model. Pdbmat> Version 3.50, Fevrier 2004. Pdbmat> Options to be read in pdbmat.dat file. Pdbmat> Coordinate filename = 2606031225422592978.atom Pdbmat> Distance cutoff = 8.00 Force constant = 10.00 Origin of mass values = CONS Pdbmat> Levelshift = 1.0E-09 PRINTing level = 2 Pdbmat> Coordinate file 2606031225422592978.atom to be opened. Openam> File opened: 2606031225422592978.atom Pdbmat> Coordinate file in PDB format. Rdatompdb> Reading pdb file. Rdatompdb> End of file reached. Rdatompdb> Number of I/O errors: 0 Rdatompdb> Number of residues found = 13 First residue number = 299 Last residue number = 311 Number of atoms found = 99 Mean number per residue = 7.6 Pdbmat> Coordinate statistics: = -9.704505 +/- 3.044872 From: -17.250000 To: -2.654000 = -10.833364 +/- 5.584661 From: -22.023000 To: -0.927000 = -29.641838 +/- 6.882110 From: -41.997000 To: -16.474000 Pdbmat> Masses are all set to one. Openam> File opened: pdbmat.xyzm Pdbmat> Coordinates and masses considered are saved. Openam> File opened: pdbmat.sdijb Pdbmat> Matrix statistics: Pdbmat> The matrix is 34.8451 % Filled. Pdbmat> 15420 non-zero elements. Pdbmat> 1649 atom-atom interactions. Pdbmat> Number per atom= 33.31 +/- 6.58 Maximum number = 46 Minimum number = 18 Pdbmat> Matrix trace = 32980.0 Pdbmat> Larger element = 228.035 Pdbmat> 0 elements larger than +/- 1.0E+10 Pdbmat> Normal end. automatic determination of NRBL (NRBL = nresidues/200 + 1) 13 non-zero elements, NRBL set to 1 Diagonalize Tirion matrix using diagrtb Diagrtb> Diagonalizes a matrix, using the RTB/BNM approximation. Diagrtb> Version 2.52, November 2004. Diagrtb> Options to be read in diagrtb.dat file. Diagrtb> Options taken into account: MATRix filename = pdbmat.sdijb COORdinates filename = 2606031225422592978.atom Eigenvector OUTPut file = matrix.eigenrtb Nb of VECTors required = 106 EigeNVALues chosen = LOWE Type of SUBStructuring = NONE Nb of residues per BLOck = 1 Origin of MASS values = CONS MATRix FORMat = BINA Temporary files cleaning = ALL Output PRINting level = 2 Diagrtb> Memory allocation for Blocpdb. Blocpdb> Entering in. Openam> file on opening on unit 10: diagrtb_work.xyzm Blocpdb> Coordinate file 2606031225422592978.atom to be opened. Openam> file on opening on unit 11: 2606031225422592978.atom Blocpdb> Coordinate file in PDB format. Blocpdb> 99 atoms picked in pdb file. Blocpdb> All masses set to unity. Blocpdb> Coordinate file is rewritten. Blocpdb> Substructuring: Blocpdb> 1 residue(s) per block. Blocpdb> 13 residues. Blocpdb> 10 atoms in block 1 Block first atom: 1 Blocpdb> 7 atoms in block 2 Block first atom: 11 Blocpdb> 11 atoms in block 3 Block first atom: 18 Blocpdb> 4 atoms in block 4 Block first atom: 29 Blocpdb> 4 atoms in block 5 Block first atom: 33 Blocpdb> 14 atoms in block 6 Block first atom: 37 Blocpdb> 7 atoms in block 7 Block first atom: 51 Blocpdb> 6 atoms in block 8 Block first atom: 58 Blocpdb> 7 atoms in block 9 Block first atom: 64 Blocpdb> 7 atoms in block 10 Block first atom: 71 Blocpdb> 8 atoms in block 11 Block first atom: 78 Blocpdb> 6 atoms in block 12 Block first atom: 86 Blocpdb> 8 atoms in block 13 Block first atom: 91 Blocpdb> 13 blocks. Blocpdb> At most, 14 atoms in each of them. Blocpdb> At least, 4 atoms in each of them. Blocpdb> Normal end of Blocpdb. Diagrtb> Memory allocation for Prepmat. Diagrtb> Memory allocation for RTB. Diagrtb> Memory allocation for Diagstd. %Diagrtb-Wn> 78 eigenvectors, only, can be determined. Diagrtb> Memory allocation for RTB_to_modes. Prepmat> Entering in. Prepmat> Rewriting of the matrix begins. Prepmat> 15433 matrix lines read. Prepmat> Matrix order = 297 Prepmat> Matrix trace = 32980.0000 Prepmat> Last element read: 297 297 162.9708 Prepmat> 92 lines saved. Prepmat> 39 empty lines. Prepmat> Number of lines on output is as expected. Prepmat> Normal end of Prepmat. RTB> Entering in. RTB> Number of atoms found in temporary coordinate file: 99 RTB> Total mass = 99.0000 RTB> Number of atoms found in matrix: 99 RTB> Number of blocks = 13 RTB> Projection begins. RTB> Projected matrix is being saved. RTB> Projected matrix trace = 6903.4718 RTB> 1677 non-zero elements. RTB> Normal end of RTB. Diagstd> Entering in. Openam> file on opening on unit 10: diagrtb_work.sdijb Diagstd> Projected matrix to be read from file: diagrtb_work.sdijb Diagstd> CERFACS matrix format. Diagstd> Projected matrix order = 78 Diagstd> Nb of non-zero elements: 1677 Diagstd> Projected matrix trace = 6903.4718 Openam> file on opening on unit 11: diagrtb_work.eigenfacs Diagstd> Diagonalization. Diagstd> 78 eigenvectors are computed. Diagstd> 78 of them to be saved. Diagstd> Sum of eigenvalues = 6903.4718 Diagstd> Best zero-eigenvalue found : 0.000000 Diagstd> 6 zero-eigenvalues, that is, below or equal to: 0.0000000 Diagstd> Selected eigenvalues: 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3716069 0.4389843 1.0951061 2.2370793 2.7843651 3.4448163 9.2861070 12.7948216 18.8416794 20.4674640 24.6523374 28.9057103 37.2001052 38.8983716 44.4026936 45.0773633 46.5410350 47.9390616 48.5025478 51.4106140 52.7673980 55.3608637 57.3047584 57.9442809 59.8736021 62.0189920 63.3612353 65.6279873 66.3334280 68.0020864 68.0942728 69.9937400 72.4463632 74.9256940 76.2525944 82.5937785 86.4560036 87.0197571 89.7175164 91.1383763 93.1272428 94.1484835 99.0030375 102.5823427 106.2959557 107.6491079 111.8643885 114.0297090 119.7735654 126.5048431 126.9514989 129.6084910 133.0434791 134.7339279 136.8292615 139.3549334 141.4922145 143.3224992 144.6177645 149.3077038 155.0126028 166.0660210 171.2739834 178.1789299 181.7004923 204.5546011 208.8901061 221.6161508 231.7754067 244.7470912 255.0641795 337.8272257 Diagstd> Frequencies (cm-1, if the input matrix is a hessian in CHARMM units): 0.0034338 0.0034339 0.0034339 0.0034339 0.0034340 0.0034340 66.1968224 71.9481737 113.6379492 162.4186767 181.2000741 201.5479171 330.9117001 388.4296712 471.3625614 491.2779787 539.1682765 583.8309357 662.3192298 677.2686772 723.6022997 729.0789055 740.8210240 751.8653047 756.2711898 778.6130449 788.8203750 807.9727410 822.0355945 826.6098369 840.2586146 855.1801898 864.3847542 879.7105959 884.4259994 895.4810487 896.0878185 908.4998926 924.2800407 939.9628025 948.2494351 986.8904525 1009.7011680 1012.9877967 1028.5701146 1036.6828734 1047.9333285 1053.6635213 1080.4869850 1099.8452581 1119.5761821 1126.6797735 1148.5269933 1159.5895376 1188.4359184 1221.3745223 1223.5288008 1236.2662333 1252.5413637 1260.4736340 1270.2370376 1281.9068089 1291.6996804 1300.0272825 1305.8885144 1326.8944833 1352.0065156 1399.3800244 1421.1534690 1449.5174683 1463.7716523 1553.1017414 1569.4743252 1616.5754679 1653.2135502 1698.8461479 1734.2831962 1995.9175809 Diagstd> Normal end. Rtb_to_modes> Entering in. Rtb_to_modes> Number of atoms in temporary block-file = 99 Rtb_to_modes> Number of blocs = 13 Openam> file on opening on unit 10: diagrtb_work.eigenfacs Openam> file on opening on unit 11: matrix.eigenrtb Rdmodfacs> Entering in. Rdmodfacs> Old Blzpack file format detected. Rdmodfacs> Eigenvector number: 1 Rdmodfacs> Corresponding eigenvalue: 9.9992E-10 Rdmodfacs> Eigenvector number: 2 Rdmodfacs> Corresponding eigenvalue: 9.9994E-10 Rdmodfacs> Eigenvector number: 3 Rdmodfacs> Corresponding eigenvalue: 9.9997E-10 Rdmodfacs> Eigenvector number: 4 Rdmodfacs> Corresponding eigenvalue: 9.9998E-10 Rdmodfacs> Eigenvector number: 5 Rdmodfacs> Corresponding eigenvalue: 1.0000E-09 Rdmodfacs> Eigenvector number: 6 Rdmodfacs> Corresponding eigenvalue: 1.0000E-09 Rdmodfacs> Eigenvector number: 7 Rdmodfacs> Corresponding eigenvalue: 0.3716 Rdmodfacs> Eigenvector number: 8 Rdmodfacs> Corresponding eigenvalue: 0.4390 Rdmodfacs> Eigenvector number: 9 Rdmodfacs> Corresponding eigenvalue: 1.095 Rdmodfacs> Eigenvector number: 10 Rdmodfacs> Corresponding eigenvalue: 2.237 Rdmodfacs> Eigenvector number: 11 Rdmodfacs> Corresponding eigenvalue: 2.784 Rdmodfacs> Eigenvector number: 12 Rdmodfacs> Corresponding eigenvalue: 3.445 Rdmodfacs> Eigenvector number: 13 Rdmodfacs> Corresponding eigenvalue: 9.286 Rdmodfacs> Eigenvector number: 14 Rdmodfacs> Corresponding eigenvalue: 12.79 Rdmodfacs> Eigenvector number: 15 Rdmodfacs> Corresponding eigenvalue: 18.84 Rdmodfacs> Eigenvector number: 16 Rdmodfacs> Corresponding eigenvalue: 20.47 Rdmodfacs> Eigenvector number: 17 Rdmodfacs> Corresponding eigenvalue: 24.65 Rdmodfacs> Eigenvector number: 18 Rdmodfacs> Corresponding eigenvalue: 28.91 Rdmodfacs> Eigenvector number: 19 Rdmodfacs> Corresponding eigenvalue: 37.20 Rdmodfacs> Eigenvector number: 20 Rdmodfacs> Corresponding eigenvalue: 38.90 Rdmodfacs> Eigenvector number: 21 Rdmodfacs> Corresponding eigenvalue: 44.40 Rdmodfacs> Eigenvector number: 22 Rdmodfacs> Corresponding eigenvalue: 45.08 Rdmodfacs> Eigenvector number: 23 Rdmodfacs> Corresponding eigenvalue: 46.54 Rdmodfacs> Eigenvector number: 24 Rdmodfacs> Corresponding eigenvalue: 47.94 Rdmodfacs> Eigenvector number: 25 Rdmodfacs> Corresponding eigenvalue: 48.50 Rdmodfacs> Eigenvector number: 26 Rdmodfacs> Corresponding eigenvalue: 51.41 Rdmodfacs> Eigenvector number: 27 Rdmodfacs> Corresponding eigenvalue: 52.77 Rdmodfacs> Eigenvector number: 28 Rdmodfacs> Corresponding eigenvalue: 55.36 Rdmodfacs> Eigenvector number: 29 Rdmodfacs> Corresponding eigenvalue: 57.30 Rdmodfacs> Eigenvector number: 30 Rdmodfacs> Corresponding eigenvalue: 57.94 Rdmodfacs> Eigenvector number: 31 Rdmodfacs> Corresponding eigenvalue: 59.87 Rdmodfacs> Eigenvector number: 32 Rdmodfacs> Corresponding eigenvalue: 62.02 Rdmodfacs> Eigenvector number: 33 Rdmodfacs> Corresponding eigenvalue: 63.36 Rdmodfacs> Eigenvector number: 34 Rdmodfacs> Corresponding eigenvalue: 65.63 Rdmodfacs> Eigenvector number: 35 Rdmodfacs> Corresponding eigenvalue: 66.33 Rdmodfacs> Eigenvector number: 36 Rdmodfacs> Corresponding eigenvalue: 68.00 Rdmodfacs> Eigenvector number: 37 Rdmodfacs> Corresponding eigenvalue: 68.09 Rdmodfacs> Eigenvector number: 38 Rdmodfacs> Corresponding eigenvalue: 69.99 Rdmodfacs> Eigenvector number: 39 Rdmodfacs> Corresponding eigenvalue: 72.45 Rdmodfacs> Eigenvector number: 40 Rdmodfacs> Corresponding eigenvalue: 74.93 Rdmodfacs> Eigenvector number: 41 Rdmodfacs> Corresponding eigenvalue: 76.25 Rdmodfacs> Eigenvector number: 42 Rdmodfacs> Corresponding eigenvalue: 82.59 Rdmodfacs> Eigenvector number: 43 Rdmodfacs> Corresponding eigenvalue: 86.46 Rdmodfacs> Eigenvector number: 44 Rdmodfacs> Corresponding eigenvalue: 87.02 Rdmodfacs> Eigenvector number: 45 Rdmodfacs> Corresponding eigenvalue: 89.72 Rdmodfacs> Eigenvector number: 46 Rdmodfacs> Corresponding eigenvalue: 91.14 Rdmodfacs> Eigenvector number: 47 Rdmodfacs> Corresponding eigenvalue: 93.13 Rdmodfacs> Eigenvector number: 48 Rdmodfacs> Corresponding eigenvalue: 94.15 Rdmodfacs> Eigenvector number: 49 Rdmodfacs> Corresponding eigenvalue: 99.00 Rdmodfacs> Eigenvector number: 50 Rdmodfacs> Corresponding eigenvalue: 102.6 Rdmodfacs> Eigenvector number: 51 Rdmodfacs> Corresponding eigenvalue: 106.3 Rdmodfacs> Eigenvector number: 52 Rdmodfacs> Corresponding eigenvalue: 107.6 Rdmodfacs> Eigenvector number: 53 Rdmodfacs> Corresponding eigenvalue: 111.9 Rdmodfacs> Eigenvector number: 54 Rdmodfacs> Corresponding eigenvalue: 114.0 Rdmodfacs> Eigenvector number: 55 Rdmodfacs> Corresponding eigenvalue: 119.8 Rdmodfacs> Eigenvector number: 56 Rdmodfacs> Corresponding eigenvalue: 126.5 Rdmodfacs> Eigenvector number: 57 Rdmodfacs> Corresponding eigenvalue: 127.0 Rdmodfacs> Eigenvector number: 58 Rdmodfacs> Corresponding eigenvalue: 129.6 Rdmodfacs> Eigenvector number: 59 Rdmodfacs> Corresponding eigenvalue: 133.0 Rdmodfacs> Eigenvector number: 60 Rdmodfacs> Corresponding eigenvalue: 134.7 Rdmodfacs> Eigenvector number: 61 Rdmodfacs> Corresponding eigenvalue: 136.8 Rdmodfacs> Eigenvector number: 62 Rdmodfacs> Corresponding eigenvalue: 139.4 Rdmodfacs> Eigenvector number: 63 Rdmodfacs> Corresponding eigenvalue: 141.5 Rdmodfacs> Eigenvector number: 64 Rdmodfacs> Corresponding eigenvalue: 143.3 Rdmodfacs> Eigenvector number: 65 Rdmodfacs> Corresponding eigenvalue: 144.6 Rdmodfacs> Eigenvector number: 66 Rdmodfacs> Corresponding eigenvalue: 149.3 Rdmodfacs> Eigenvector number: 67 Rdmodfacs> Corresponding eigenvalue: 155.0 Rdmodfacs> Eigenvector number: 68 Rdmodfacs> Corresponding eigenvalue: 166.1 Rdmodfacs> Eigenvector number: 69 Rdmodfacs> Corresponding eigenvalue: 171.3 Rdmodfacs> Eigenvector number: 70 Rdmodfacs> Corresponding eigenvalue: 178.2 Rdmodfacs> Eigenvector number: 71 Rdmodfacs> Corresponding eigenvalue: 181.7 Rdmodfacs> Eigenvector number: 72 Rdmodfacs> Corresponding eigenvalue: 204.6 Rdmodfacs> Eigenvector number: 73 Rdmodfacs> Corresponding eigenvalue: 208.9 Rdmodfacs> Eigenvector number: 74 Rdmodfacs> Corresponding eigenvalue: 221.6 Rdmodfacs> Eigenvector number: 75 Rdmodfacs> Corresponding eigenvalue: 231.8 Rdmodfacs> Eigenvector number: 76 Rdmodfacs> Corresponding eigenvalue: 244.7 Rdmodfacs> Eigenvector number: 77 Rdmodfacs> Corresponding eigenvalue: 255.1 Rdmodfacs> Eigenvector number: 78 Rdmodfacs> Corresponding eigenvalue: 337.8 Rtb_to_modes> 78 vectors, with 78 coordinates in vector file. Norm of eigenvectors in projected coordinates (one expected): 1.00001 1.00002 0.99999 1.00001 0.99997 1.00003 1.00005 0.99999 1.00003 1.00002 0.99998 0.99996 1.00003 1.00000 1.00001 1.00005 1.00002 1.00002 1.00007 1.00000 0.99997 1.00003 1.00000 0.99998 1.00001 0.99999 1.00000 1.00000 0.99999 0.99999 1.00002 1.00002 0.99999 1.00000 1.00003 0.99994 1.00003 0.99997 1.00000 1.00000 0.99998 1.00002 0.99999 1.00002 1.00002 0.99998 0.99999 1.00002 1.00003 1.00001 0.99995 0.99999 0.99994 1.00003 1.00004 1.00004 1.00003 1.00004 1.00001 1.00002 1.00001 0.99999 0.99997 0.99997 1.00001 1.00003 1.00001 0.99998 1.00001 0.99998 1.00001 0.99997 0.99999 1.00003 1.00000 0.99999 1.00000 0.99999 Rtb_to_modes> RTB block-file is being read. Rtb_to_modes> 1782 lines found in RTB file. Norm of eigenvectors in cartesian coordinates (one expected): 1.00001 1.00002 0.99999 1.00001 0.99997 1.00003 1.00005 0.99999 1.00003 1.00002 0.99998 0.99996 1.00003 1.00000 1.00001 1.00005 1.00002 1.00002 1.00007 1.00000 0.99997 1.00003 1.00000 0.99998 1.00001 0.99999 1.00000 1.00000 0.99999 0.99999 1.00002 1.00002 0.99999 1.00000 1.00003 0.99994 1.00003 0.99997 1.00000 1.00000 0.99998 1.00002 0.99999 1.00002 1.00002 0.99998 0.99999 1.00002 1.00003 1.00001 0.99995 0.99999 0.99994 1.00003 1.00004 1.00004 1.00003 1.00004 1.00001 1.00002 1.00001 0.99999 0.99997 0.99997 1.00001 1.00003 1.00001 0.99998 1.00001 0.99998 1.00001 0.99997 0.99999 1.00003 1.00000 0.99999 1.00000 0.99999 Orthogonality of first eigenvectors (zero expected): Vector 2: 0.000 Vector 3: 0.000-0.000 Vector 4:-0.000 0.000 0.000 Vector 5: 0.000-0.000-0.000 0.000 Vector 6: 0.000-0.000-0.000-0.000 0.000 Vector 7: 0.000-0.000-0.000-0.000-0.000 0.000 Vector 8:-0.000 0.000-0.000-0.000 0.000-0.000-0.000 Vector 9: 0.000-0.000 0.000 0.000 0.000 0.000-0.000 0.000 Vector 10: 0.000-0.000-0.000-0.000 0.000 0.000-0.000-0.000 0.000 Rtb_to_modes> 78 eigenvectors saved. Rtb_to_modes> Normal end. Diagrtb> Normal end. B-factor analysis Bfactors> Version 1.22, Bordeaux. Getnam> Eigenvector filename ? Getnam> 2606031225422592978.eigenfacs Openam> file on opening on unit 10: 2606031225422592978.eigenfacs Getnam> Corresponding pdb filename ? Getnam> 2606031225422592978.atom Openam> file on opening on unit 11: 2606031225422592978.atom Getnum> Number of skipped eigenvectors ? Getnum> 0 Getnum> Number of usefull eigenvectors ? Getnum> 10000 %Getnum-Err: number larger than 106 This is not allowed. Sorry. Rdatompdb> Reading pdb file. Rdatompdb> End of file reached. Rdatompdb> Number of I/O errors: 0 Rdatompdb> Number of residues found = 13 First residue number = 299 Last residue number = 311 Number of atoms found = 99 Mean number per residue = 7.6 Rdmodfacs> Old Blzpack file format detected. Rdmodfacs> Numero du vecteur CERFACS en lecture: 1 Rdmodfacs> Valeur propre du vecteur en lecture: 9.9992E-10 Rdmodfacs> Numero du vecteur CERFACS en lecture: 2 Rdmodfacs> Valeur propre du vecteur en lecture: 9.9994E-10 Rdmodfacs> Numero du vecteur CERFACS en lecture: 3 Rdmodfacs> Valeur propre du vecteur en lecture: 9.9997E-10 Rdmodfacs> Numero du vecteur CERFACS en lecture: 4 Rdmodfacs> Valeur propre du vecteur en lecture: 9.9998E-10 Rdmodfacs> Numero du vecteur CERFACS en lecture: 5 Rdmodfacs> Valeur propre du vecteur en lecture: 1.0000E-09 Rdmodfacs> Numero du vecteur CERFACS en lecture: 6 Rdmodfacs> Valeur propre du vecteur en lecture: 1.0000E-09 Rdmodfacs> Numero du vecteur CERFACS en lecture: 7 Rdmodfacs> Valeur propre du vecteur en lecture: 0.3716 Rdmodfacs> Numero du vecteur CERFACS en lecture: 8 Rdmodfacs> Valeur propre du vecteur en lecture: 0.4390 Rdmodfacs> Numero du vecteur CERFACS en lecture: 9 Rdmodfacs> Valeur propre du vecteur en lecture: 1.095 Rdmodfacs> Numero du vecteur CERFACS en lecture: 10 Rdmodfacs> Valeur propre du vecteur en lecture: 2.237 Rdmodfacs> Numero du vecteur CERFACS en lecture: 11 Rdmodfacs> Valeur propre du vecteur en lecture: 2.784 Rdmodfacs> Numero du vecteur CERFACS en lecture: 12 Rdmodfacs> Valeur propre du vecteur en lecture: 3.445 Rdmodfacs> Numero du vecteur CERFACS en lecture: 13 Rdmodfacs> Valeur propre du vecteur en lecture: 9.286 Rdmodfacs> Numero du vecteur CERFACS en lecture: 14 Rdmodfacs> Valeur propre du vecteur en lecture: 12.79 Rdmodfacs> Numero du vecteur CERFACS en lecture: 15 Rdmodfacs> Valeur propre du vecteur en lecture: 18.84 Rdmodfacs> Numero du vecteur CERFACS en lecture: 16 Rdmodfacs> Valeur propre du vecteur en lecture: 20.47 Rdmodfacs> Numero du vecteur CERFACS en lecture: 17 Rdmodfacs> Valeur propre du vecteur en lecture: 24.65 Rdmodfacs> Numero du vecteur CERFACS en lecture: 18 Rdmodfacs> Valeur propre du vecteur en lecture: 28.91 Rdmodfacs> Numero du vecteur CERFACS en lecture: 19 Rdmodfacs> Valeur propre du vecteur en lecture: 37.20 Rdmodfacs> Numero du vecteur CERFACS en lecture: 20 Rdmodfacs> Valeur propre du vecteur en lecture: 38.90 Rdmodfacs> Numero du vecteur CERFACS en lecture: 21 Rdmodfacs> Valeur propre du vecteur en lecture: 44.40 Rdmodfacs> Numero du vecteur CERFACS en lecture: 22 Rdmodfacs> Valeur propre du vecteur en lecture: 45.08 Rdmodfacs> Numero du vecteur CERFACS en lecture: 23 Rdmodfacs> Valeur propre du vecteur en lecture: 46.54 Rdmodfacs> Numero du vecteur CERFACS en lecture: 24 Rdmodfacs> Valeur propre du vecteur en lecture: 47.94 Rdmodfacs> Numero du vecteur CERFACS en lecture: 25 Rdmodfacs> Valeur propre du vecteur en lecture: 48.50 Rdmodfacs> Numero du vecteur CERFACS en lecture: 26 Rdmodfacs> Valeur propre du vecteur en lecture: 51.41 Rdmodfacs> Numero du vecteur CERFACS en lecture: 27 Rdmodfacs> Valeur propre du vecteur en lecture: 52.77 Rdmodfacs> Numero du vecteur CERFACS en lecture: 28 Rdmodfacs> Valeur propre du vecteur en lecture: 55.36 Rdmodfacs> Numero du vecteur CERFACS en lecture: 29 Rdmodfacs> Valeur propre du vecteur en lecture: 57.30 Rdmodfacs> Numero du vecteur CERFACS en lecture: 30 Rdmodfacs> Valeur propre du vecteur en lecture: 57.94 Rdmodfacs> Numero du vecteur CERFACS en lecture: 31 Rdmodfacs> Valeur propre du vecteur en lecture: 59.87 Rdmodfacs> Numero du vecteur CERFACS en lecture: 32 Rdmodfacs> Valeur propre du vecteur en lecture: 62.02 Rdmodfacs> Numero du vecteur CERFACS en lecture: 33 Rdmodfacs> Valeur propre du vecteur en lecture: 63.36 Rdmodfacs> Numero du vecteur CERFACS en lecture: 34 Rdmodfacs> Valeur propre du vecteur en lecture: 65.63 Rdmodfacs> Numero du vecteur CERFACS en lecture: 35 Rdmodfacs> Valeur propre du vecteur en lecture: 66.33 Rdmodfacs> Numero du vecteur CERFACS en lecture: 36 Rdmodfacs> Valeur propre du vecteur en lecture: 68.00 Rdmodfacs> Numero du vecteur CERFACS en lecture: 37 Rdmodfacs> Valeur propre du vecteur en lecture: 68.09 Rdmodfacs> Numero du vecteur CERFACS en lecture: 38 Rdmodfacs> Valeur propre du vecteur en lecture: 69.99 Rdmodfacs> Numero du vecteur CERFACS en lecture: 39 Rdmodfacs> Valeur propre du vecteur en lecture: 72.45 Rdmodfacs> Numero du vecteur CERFACS en lecture: 40 Rdmodfacs> Valeur propre du vecteur en lecture: 74.93 Rdmodfacs> Numero du vecteur CERFACS en lecture: 41 Rdmodfacs> Valeur propre du vecteur en lecture: 76.25 Rdmodfacs> Numero du vecteur CERFACS en lecture: 42 Rdmodfacs> Valeur propre du vecteur en lecture: 82.59 Rdmodfacs> Numero du vecteur CERFACS en lecture: 43 Rdmodfacs> Valeur propre du vecteur en lecture: 86.46 Rdmodfacs> Numero du vecteur CERFACS en lecture: 44 Rdmodfacs> Valeur propre du vecteur en lecture: 87.02 Rdmodfacs> Numero du vecteur CERFACS en lecture: 45 Rdmodfacs> Valeur propre du vecteur en lecture: 89.72 Rdmodfacs> Numero du vecteur CERFACS en lecture: 46 Rdmodfacs> Valeur propre du vecteur en lecture: 91.14 Rdmodfacs> Numero du vecteur CERFACS en lecture: 47 Rdmodfacs> Valeur propre du vecteur en lecture: 93.13 Rdmodfacs> Numero du vecteur CERFACS en lecture: 48 Rdmodfacs> Valeur propre du vecteur en lecture: 94.15 Rdmodfacs> Numero du vecteur CERFACS en lecture: 49 Rdmodfacs> Valeur propre du vecteur en lecture: 99.00 Rdmodfacs> Numero du vecteur CERFACS en lecture: 50 Rdmodfacs> Valeur propre du vecteur en lecture: 102.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 51 Rdmodfacs> Valeur propre du vecteur en lecture: 106.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 52 Rdmodfacs> Valeur propre du vecteur en lecture: 107.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 53 Rdmodfacs> Valeur propre du vecteur en lecture: 111.9 Rdmodfacs> Numero du vecteur CERFACS en lecture: 54 Rdmodfacs> Valeur propre du vecteur en lecture: 114.0 Rdmodfacs> Numero du vecteur CERFACS en lecture: 55 Rdmodfacs> Valeur propre du vecteur en lecture: 119.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 56 Rdmodfacs> Valeur propre du vecteur en lecture: 126.5 Rdmodfacs> Numero du vecteur CERFACS en lecture: 57 Rdmodfacs> Valeur propre du vecteur en lecture: 127.0 Rdmodfacs> Numero du vecteur CERFACS en lecture: 58 Rdmodfacs> Valeur propre du vecteur en lecture: 129.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 59 Rdmodfacs> Valeur propre du vecteur en lecture: 133.0 Rdmodfacs> Numero du vecteur CERFACS en lecture: 60 Rdmodfacs> Valeur propre du vecteur en lecture: 134.7 Rdmodfacs> Numero du vecteur CERFACS en lecture: 61 Rdmodfacs> Valeur propre du vecteur en lecture: 136.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 62 Rdmodfacs> Valeur propre du vecteur en lecture: 139.4 Rdmodfacs> Numero du vecteur CERFACS en lecture: 63 Rdmodfacs> Valeur propre du vecteur en lecture: 141.5 Rdmodfacs> Numero du vecteur CERFACS en lecture: 64 Rdmodfacs> Valeur propre du vecteur en lecture: 143.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 65 Rdmodfacs> Valeur propre du vecteur en lecture: 144.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 66 Rdmodfacs> Valeur propre du vecteur en lecture: 149.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 67 Rdmodfacs> Valeur propre du vecteur en lecture: 155.0 Rdmodfacs> Numero du vecteur CERFACS en lecture: 68 Rdmodfacs> Valeur propre du vecteur en lecture: 166.1 Rdmodfacs> Numero du vecteur CERFACS en lecture: 69 Rdmodfacs> Valeur propre du vecteur en lecture: 171.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 70 Rdmodfacs> Valeur propre du vecteur en lecture: 178.2 Rdmodfacs> Numero du vecteur CERFACS en lecture: 71 Rdmodfacs> Valeur propre du vecteur en lecture: 181.7 Rdmodfacs> Numero du vecteur CERFACS en lecture: 72 Rdmodfacs> Valeur propre du vecteur en lecture: 204.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 73 Rdmodfacs> Valeur propre du vecteur en lecture: 208.9 Rdmodfacs> Numero du vecteur CERFACS en lecture: 74 Rdmodfacs> Valeur propre du vecteur en lecture: 221.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 75 Rdmodfacs> Valeur propre du vecteur en lecture: 231.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 76 Rdmodfacs> Valeur propre du vecteur en lecture: 244.7 Rdmodfacs> Numero du vecteur CERFACS en lecture: 77 Rdmodfacs> Valeur propre du vecteur en lecture: 255.1 Rdmodfacs> Numero du vecteur CERFACS en lecture: 78 Rdmodfacs> Valeur propre du vecteur en lecture: 337.8 Bfactors> 78 vectors, 297 coordinates in file. %Bfactors-Wn> All vectors required were not found in vector file. Openam> file on opening on unit 12: bfactors.pred Bfactors> Best zero-eigenvalue found : 0.000000 Bfactors> 6 eigenvalues less than : 0.000000 Bfactors> Lowest non-zero eigenvalue : 0.371600 Bfactors> 72 eigenvectors will be considered. Bfactors> Rotation-Tranlation modes are skipped. Bfactors> Mass-weighted B-factors are computed. (CHARMM units assumed for eigenvalues) Bfactors> Correlation= 0.268 for 13 C-alpha atoms. Bfactors> = 0.878 +/- 0.38 Bfactors> = 0.363 +/- 0.09 Bfactors> Shiftng-fct= -0.515 Bfactors> Scaling-fct= 0.232 Bfactors> Predicted, Scaled and Experimental B-factors are saved. Bfactors> Normal end. check_modes Chkmod> Version 1.00, Bordeaux. Getnam> Eigenvector filename ? Getnam> 2606031225422592978.eigenfacs Openam> file on opening on unit 10: 2606031225422592978.eigenfacs Rdmodfacs> Old Blzpack file format detected. Rdmodfacs> Numero du vecteur CERFACS en lecture: 1 Rdmodfacs> Frequence du vecteur en lecture: 3.4337E-03 Rdmodfacs> Numero du vecteur CERFACS en lecture: 2 Rdmodfacs> Frequence du vecteur en lecture: 3.4337E-03 Rdmodfacs> Numero du vecteur CERFACS en lecture: 3 Rdmodfacs> Frequence du vecteur en lecture: 3.4338E-03 Rdmodfacs> Numero du vecteur CERFACS en lecture: 4 Rdmodfacs> Frequence du vecteur en lecture: 3.4338E-03 Rdmodfacs> Numero du vecteur CERFACS en lecture: 5 Rdmodfacs> Frequence du vecteur en lecture: 3.4338E-03 Rdmodfacs> Numero du vecteur CERFACS en lecture: 6 Rdmodfacs> Frequence du vecteur en lecture: 3.4338E-03 Rdmodfacs> Numero du vecteur CERFACS en lecture: 7 Rdmodfacs> Frequence du vecteur en lecture: 66.19 Rdmodfacs> Numero du vecteur CERFACS en lecture: 8 Rdmodfacs> Frequence du vecteur en lecture: 71.95 Rdmodfacs> Numero du vecteur CERFACS en lecture: 9 Rdmodfacs> Frequence du vecteur en lecture: 113.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 10 Rdmodfacs> Frequence du vecteur en lecture: 162.4 Rdmodfacs> Numero du vecteur CERFACS en lecture: 11 Rdmodfacs> Frequence du vecteur en lecture: 181.2 Rdmodfacs> Numero du vecteur CERFACS en lecture: 12 Rdmodfacs> Frequence du vecteur en lecture: 201.5 Rdmodfacs> Numero du vecteur CERFACS en lecture: 13 Rdmodfacs> Frequence du vecteur en lecture: 330.9 Rdmodfacs> Numero du vecteur CERFACS en lecture: 14 Rdmodfacs> Frequence du vecteur en lecture: 388.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 15 Rdmodfacs> Frequence du vecteur en lecture: 471.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 16 Rdmodfacs> Frequence du vecteur en lecture: 491.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 17 Rdmodfacs> Frequence du vecteur en lecture: 539.1 Rdmodfacs> Numero du vecteur CERFACS en lecture: 18 Rdmodfacs> Frequence du vecteur en lecture: 583.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 19 Rdmodfacs> Frequence du vecteur en lecture: 662.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 20 Rdmodfacs> Frequence du vecteur en lecture: 677.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 21 Rdmodfacs> Frequence du vecteur en lecture: 723.5 Rdmodfacs> Numero du vecteur CERFACS en lecture: 22 Rdmodfacs> Frequence du vecteur en lecture: 729.1 Rdmodfacs> Numero du vecteur CERFACS en lecture: 23 Rdmodfacs> Frequence du vecteur en lecture: 740.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 24 Rdmodfacs> Frequence du vecteur en lecture: 751.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 25 Rdmodfacs> Frequence du vecteur en lecture: 756.2 Rdmodfacs> Numero du vecteur CERFACS en lecture: 26 Rdmodfacs> Frequence du vecteur en lecture: 778.6 Rdmodfacs> Numero du vecteur CERFACS en lecture: 27 Rdmodfacs> Frequence du vecteur en lecture: 788.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 28 Rdmodfacs> Frequence du vecteur en lecture: 807.9 Rdmodfacs> Numero du vecteur CERFACS en lecture: 29 Rdmodfacs> Frequence du vecteur en lecture: 822.0 Rdmodfacs> Numero du vecteur CERFACS en lecture: 30 Rdmodfacs> Frequence du vecteur en lecture: 826.5 Rdmodfacs> Numero du vecteur CERFACS en lecture: 31 Rdmodfacs> Frequence du vecteur en lecture: 840.2 Rdmodfacs> Numero du vecteur CERFACS en lecture: 32 Rdmodfacs> Frequence du vecteur en lecture: 855.2 Rdmodfacs> Numero du vecteur CERFACS en lecture: 33 Rdmodfacs> Frequence du vecteur en lecture: 864.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 34 Rdmodfacs> Frequence du vecteur en lecture: 879.7 Rdmodfacs> Numero du vecteur CERFACS en lecture: 35 Rdmodfacs> Frequence du vecteur en lecture: 884.4 Rdmodfacs> Numero du vecteur CERFACS en lecture: 36 Rdmodfacs> Frequence du vecteur en lecture: 895.4 Rdmodfacs> Numero du vecteur CERFACS en lecture: 37 Rdmodfacs> Frequence du vecteur en lecture: 896.0 Rdmodfacs> Numero du vecteur CERFACS en lecture: 38 Rdmodfacs> Frequence du vecteur en lecture: 908.4 Rdmodfacs> Numero du vecteur CERFACS en lecture: 39 Rdmodfacs> Frequence du vecteur en lecture: 924.3 Rdmodfacs> Numero du vecteur CERFACS en lecture: 40 Rdmodfacs> Frequence du vecteur en lecture: 939.9 Rdmodfacs> Numero du vecteur CERFACS en lecture: 41 Rdmodfacs> Frequence du vecteur en lecture: 948.2 Rdmodfacs> Numero du vecteur CERFACS en lecture: 42 Rdmodfacs> Frequence du vecteur en lecture: 986.8 Rdmodfacs> Numero du vecteur CERFACS en lecture: 43 Rdmodfacs> Frequence du vecteur en lecture: 1010. Rdmodfacs> Numero du vecteur CERFACS en lecture: 44 Rdmodfacs> Frequence du vecteur en lecture: 1013. Rdmodfacs> Numero du vecteur CERFACS en lecture: 45 Rdmodfacs> Frequence du vecteur en lecture: 1029. Rdmodfacs> Numero du vecteur CERFACS en lecture: 46 Rdmodfacs> Frequence du vecteur en lecture: 1037. Rdmodfacs> Numero du vecteur CERFACS en lecture: 47 Rdmodfacs> Frequence du vecteur en lecture: 1048. Rdmodfacs> Numero du vecteur CERFACS en lecture: 48 Rdmodfacs> Frequence du vecteur en lecture: 1054. Rdmodfacs> Numero du vecteur CERFACS en lecture: 49 Rdmodfacs> Frequence du vecteur en lecture: 1080. Rdmodfacs> Numero du vecteur CERFACS en lecture: 50 Rdmodfacs> Frequence du vecteur en lecture: 1100. Rdmodfacs> Numero du vecteur CERFACS en lecture: 51 Rdmodfacs> Frequence du vecteur en lecture: 1120. Rdmodfacs> Numero du vecteur CERFACS en lecture: 52 Rdmodfacs> Frequence du vecteur en lecture: 1126. Rdmodfacs> Numero du vecteur CERFACS en lecture: 53 Rdmodfacs> Frequence du vecteur en lecture: 1149. Rdmodfacs> Numero du vecteur CERFACS en lecture: 54 Rdmodfacs> Frequence du vecteur en lecture: 1159. Rdmodfacs> Numero du vecteur CERFACS en lecture: 55 Rdmodfacs> Frequence du vecteur en lecture: 1189. Rdmodfacs> Numero du vecteur CERFACS en lecture: 56 Rdmodfacs> Frequence du vecteur en lecture: 1221. Rdmodfacs> Numero du vecteur CERFACS en lecture: 57 Rdmodfacs> Frequence du vecteur en lecture: 1224. Rdmodfacs> Numero du vecteur CERFACS en lecture: 58 Rdmodfacs> Frequence du vecteur en lecture: 1236. Rdmodfacs> Numero du vecteur CERFACS en lecture: 59 Rdmodfacs> Frequence du vecteur en lecture: 1252. Rdmodfacs> Numero du vecteur CERFACS en lecture: 60 Rdmodfacs> Frequence du vecteur en lecture: 1260. Rdmodfacs> Numero du vecteur CERFACS en lecture: 61 Rdmodfacs> Frequence du vecteur en lecture: 1270. Rdmodfacs> Numero du vecteur CERFACS en lecture: 62 Rdmodfacs> Frequence du vecteur en lecture: 1282. Rdmodfacs> Numero du vecteur CERFACS en lecture: 63 Rdmodfacs> Frequence du vecteur en lecture: 1292. Rdmodfacs> Numero du vecteur CERFACS en lecture: 64 Rdmodfacs> Frequence du vecteur en lecture: 1300. Rdmodfacs> Numero du vecteur CERFACS en lecture: 65 Rdmodfacs> Frequence du vecteur en lecture: 1306. Rdmodfacs> Numero du vecteur CERFACS en lecture: 66 Rdmodfacs> Frequence du vecteur en lecture: 1327. Rdmodfacs> Numero du vecteur CERFACS en lecture: 67 Rdmodfacs> Frequence du vecteur en lecture: 1352. Rdmodfacs> Numero du vecteur CERFACS en lecture: 68 Rdmodfacs> Frequence du vecteur en lecture: 1399. Rdmodfacs> Numero du vecteur CERFACS en lecture: 69 Rdmodfacs> Frequence du vecteur en lecture: 1421. Rdmodfacs> Numero du vecteur CERFACS en lecture: 70 Rdmodfacs> Frequence du vecteur en lecture: 1450. Rdmodfacs> Numero du vecteur CERFACS en lecture: 71 Rdmodfacs> Frequence du vecteur en lecture: 1464. Rdmodfacs> Numero du vecteur CERFACS en lecture: 72 Rdmodfacs> Frequence du vecteur en lecture: 1553. Rdmodfacs> Numero du vecteur CERFACS en lecture: 73 Rdmodfacs> Frequence du vecteur en lecture: 1569. Rdmodfacs> Numero du vecteur CERFACS en lecture: 74 Rdmodfacs> Frequence du vecteur en lecture: 1616. Rdmodfacs> Numero du vecteur CERFACS en lecture: 75 Rdmodfacs> Frequence du vecteur en lecture: 1653. Rdmodfacs> Numero du vecteur CERFACS en lecture: 76 Rdmodfacs> Frequence du vecteur en lecture: 1699. Rdmodfacs> Numero du vecteur CERFACS en lecture: 77 Rdmodfacs> Frequence du vecteur en lecture: 1734. Rdmodfacs> Numero du vecteur CERFACS en lecture: 78 Rdmodfacs> Frequence du vecteur en lecture: 1996. Chkmod> 78 vectors, 297 coordinates in file. Chkmod> That is: 99 cartesian points. Openam> file on opening on unit 11: Chkmod.res Chkmod> Collectivity=f(frequency) to be written in this file. %Chkmod-Wn> Norm of vector 4 is: 1.0001 (instead of 1.0000). %Chkmod-Wn> Norm of vector 7 is: 1.0001 (instead of 1.0000). %Chkmod-Wn> Norm of vector 16 is: 1.0001 (instead of 1.0000). %Chkmod-Wn> Norm of vector 19 is: 1.0002 (instead of 1.0000). %Chkmod-Wn> Norm of vector 31 is: 1.0001 (instead of 1.0000). %Chkmod-Wn> Norm of vector 36 is: 0.9998 (instead of 1.0000). %Chkmod-Wn> Norm of vector 38 is: 0.9999 (instead of 1.0000). %Chkmod-Wn> Norm of vector 53 is: 0.9999 (instead of 1.0000). %Chkmod-Wn> Norm of vector 54 is: 1.0001 (instead of 1.0000). %Chkmod-Wn> Norm of vector 57 is: 1.0002 (instead of 1.0000). Chkmod> Normal end. 0.0034 0.6565 0.0034 0.7500 0.0034 0.8413 0.0034 0.7698 0.0034 0.6547 0.0034 0.9662 66.1934 0.5955 71.9464 0.6610 113.6276 0.7443 162.4088 0.5301 181.1804 0.7531 201.5446 0.6155 330.8956 0.7506 388.3398 0.7475 471.3213 0.7101 491.2873 0.4658 539.1196 0.4227 583.8492 0.5755 662.2899 0.4866 677.2538 0.3138 723.5493 0.5716 729.0689 0.4441 740.7810 0.1519 751.8404 0.5184 756.2189 0.3685 778.5750 0.1772 788.8060 0.3124 807.9318 0.5425 821.9662 0.5422 826.5438 0.3181 840.1973 0.4189 855.1504 0.1878 864.3392 0.3136 879.6863 0.2435 884.3652 0.4842 895.4289 0.3903 896.0212 0.2220 908.4366 0.3683 924.2636 0.4721 939.9495 0.5218 948.1926 0.3964 986.8255 0.4946 1009.6812 0.4051 1012.9457 0.3255 1028.5402 0.4244 1036.6476 0.2683 1047.9039 0.3176 1053.6268 0.2143 1080.4240 0.5118 1099.8927 0.6034 1119.5494 0.5130 1126.3744 0.6205 1148.6605 0.2603 1159.3887 0.0741 1188.5160 0.3393 1221.2987 0.2842 1223.7100 0.3284 1236.1727 0.3233 1252.2829 0.3972 1260.2608 0.2550 1270.0467 0.3574 1282.0590 0.1441 1291.6798 0.4840 1299.8694 0.5991 1305.7523 0.3949 1326.8033 0.3723 1351.8935 0.2384 1399.4631 0.5694 1421.2004 0.1267 1449.5409 0.4580 1463.7068 0.4553 1553.2074 0.1745 1569.4441 0.3302 1616.4472 0.6027 1653.2303 0.5551 1698.6098 0.3014 1734.3305 0.3102 1995.7515 0.2219 getting mode 7 running: ../../bin/get_modes.sh 2606031225422592978 7 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 7 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.7.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.7.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.7.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 8 running: ../../bin/get_modes.sh 2606031225422592978 8 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 8 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.8.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.8.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.8.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 9 running: ../../bin/get_modes.sh 2606031225422592978 9 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 9 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.9.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.9.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.9.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 10 running: ../../bin/get_modes.sh 2606031225422592978 10 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 10 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.10.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.10.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.10.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 11 running: ../../bin/get_modes.sh 2606031225422592978 11 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 11 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.11.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.11.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.11.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 12 running: ../../bin/get_modes.sh 2606031225422592978 12 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 12 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.12.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.12.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.12.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 13 running: ../../bin/get_modes.sh 2606031225422592978 13 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 13 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.13.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.13.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.13.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 14 running: ../../bin/get_modes.sh 2606031225422592978 14 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 14 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.14.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.14.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.14.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 15 running: ../../bin/get_modes.sh 2606031225422592978 15 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 15 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.15.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.15.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.15.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 16 running: ../../bin/get_modes.sh 2606031225422592978 16 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 16 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.16.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.16.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.16.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 17 running: ../../bin/get_modes.sh 2606031225422592978 17 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 17 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.17.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.17.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.17.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 18 running: ../../bin/get_modes.sh 2606031225422592978 18 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 18 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.18.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.18.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.18.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 19 running: ../../bin/get_modes.sh 2606031225422592978 19 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 19 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.19.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.19.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.19.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 20 running: ../../bin/get_modes.sh 2606031225422592978 20 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 20 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.20.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.20.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.20.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 21 running: ../../bin/get_modes.sh 2606031225422592978 21 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 21 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.21.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.21.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.21.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 22 running: ../../bin/get_modes.sh 2606031225422592978 22 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 22 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.22.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.22.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.22.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 23 running: ../../bin/get_modes.sh 2606031225422592978 23 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 23 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.23.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.23.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.23.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 24 running: ../../bin/get_modes.sh 2606031225422592978 24 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 24 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.24.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.24.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.24.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 25 running: ../../bin/get_modes.sh 2606031225422592978 25 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 25 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.25.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.25.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.25.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 26 running: ../../bin/get_modes.sh 2606031225422592978 26 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 26 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.26.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.26.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.26.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 27 running: ../../bin/get_modes.sh 2606031225422592978 27 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 27 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.27.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.27.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.27.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 28 running: ../../bin/get_modes.sh 2606031225422592978 28 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 28 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.28.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.28.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.28.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 29 running: ../../bin/get_modes.sh 2606031225422592978 29 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 29 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.29.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.29.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.29.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 30 running: ../../bin/get_modes.sh 2606031225422592978 30 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 30 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.30.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.30.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.30.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 getting mode 31 running: ../../bin/get_modes.sh 2606031225422592978 31 -100 100 20 on 0 normal mode computation generate a series of perturbations for mode 31 calculating perturbed structure for DQ=-100 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=-20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=0 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=20 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=40 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=60 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=80 2606031225422592978.eigenfacs 2606031225422592978.atom calculating perturbed structure for DQ=100 2606031225422592978.eigenfacs 2606031225422592978.atom making animated gifs 11 models are in 2606031225422592978.31.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.31.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 11 models are in 2606031225422592978.31.pdb, 1 models will be skipped MODEL 1 will be plotted MODEL 3 will be plotted MODEL 5 will be plotted MODEL 7 will be plotted MODEL 9 will be plotted MODEL 11 will be plotted making thumbnail 100x100 making small animated gif 100x100 making animated gif 300x300 2606031225422592978.10.pdb 2606031225422592978.11.pdb 2606031225422592978.12.pdb 2606031225422592978.13.pdb 2606031225422592978.14.pdb 2606031225422592978.15.pdb 2606031225422592978.16.pdb 2606031225422592978.17.pdb 2606031225422592978.18.pdb 2606031225422592978.19.pdb 2606031225422592978.20.pdb 2606031225422592978.21.pdb 2606031225422592978.22.pdb 2606031225422592978.23.pdb 2606031225422592978.24.pdb 2606031225422592978.25.pdb 2606031225422592978.26.pdb 2606031225422592978.27.pdb 2606031225422592978.28.pdb 2606031225422592978.29.pdb 2606031225422592978.30.pdb 2606031225422592978.31.pdb 2606031225422592978.7.pdb 2606031225422592978.8.pdb 2606031225422592978.9.pdb STDERR: Note: The following floating-point exceptions are signalling: IEEE_DENORMAL real 0m0.056s user 0m0.046s sys 0m0.010s rm: cannot remove '2606031225422592978.sdijf': No such file or directory pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing ppmraw format pstopnm: Writing 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Last modification: april 24th, 2026.