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***  LAO_closed_cutoff10  ***

Normal Mode Analysis for ID 260611153325771059

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0059
mode 8 1.31 0.0705
mode 9 1.37 0.5881
mode 10 1.53 0.4907
mode 11 1.57 0.5838
mode 12 1.76 0.0971
mode 13 2.14 0.3026
mode 14 2.17 0.3415
mode 15 2.21 0.0628
mode 16 2.42 0.1038
mode 17 2.47 0.5615
mode 18 2.63 0.3978
mode 19 2.73 0.1027
mode 20 2.76 0.6121
mode 21 2.81 0.6761
mode 22 2.96 0.3275
mode 23 3.01 0.5311
mode 24 3.11 0.2663
mode 25 3.18 0.4832
mode 26 3.22 0.3638
mode 27 3.35 0.5167
mode 28 3.36 0.5567
mode 29 3.45 0.0939
mode 30 3.56 0.2992
mode 31 3.59 0.1764
mode 32 3.65 0.5482
mode 33 3.70 0.3698
mode 34 3.72 0.3336
mode 35 3.80 0.5183
mode 36 3.84 0.6113
mode 37 3.89 0.3266
mode 38 4.01 0.4292
mode 39 4.04 0.2112
mode 40 4.09 0.3708
mode 41 4.21 0.4141
mode 42 4.23 0.4968
mode 43 4.29 0.4955
mode 44 4.32 0.5213
mode 45 4.35 0.3591
mode 46 4.43 0.3760
mode 47 4.49 0.4167
mode 48 4.52 0.4872
mode 49 4.57 0.3765
mode 50 4.58 0.3583
mode 51 4.65 0.4683
mode 52 4.72 0.3536
mode 53 4.77 0.4293
mode 54 4.81 0.3050
mode 55 4.87 0.2966
mode 56 4.89 0.4015
mode 57 4.94 0.5730
mode 58 5.02 0.4681
mode 59 5.05 0.5429
mode 60 5.05 0.4528
mode 61 5.23 0.5017
mode 62 5.26 0.5065
mode 63 5.31 0.5219
mode 64 5.33 0.5214
mode 65 5.34 0.5312
mode 66 5.41 0.3637
mode 67 5.42 0.2015
mode 68 5.45 0.4288
mode 69 5.47 0.4609
mode 70 5.50 0.5042
mode 71 5.55 0.3425
mode 72 5.60 0.3753
mode 73 5.63 0.3054
mode 74 5.68 0.4484
mode 75 5.72 0.4112
mode 76 5.78 0.4724
mode 77 5.82 0.4106
mode 78 5.83 0.2794
mode 79 5.85 0.4506
mode 80 5.87 0.4678
mode 81 5.89 0.3000
mode 82 5.91 0.4201
mode 83 5.94 0.4699
mode 84 5.97 0.4645
mode 85 6.00 0.4723
mode 86 6.04 0.3716
mode 87 6.10 0.4973
mode 88 6.11 0.3331
mode 89 6.12 0.1059
mode 90 6.17 0.5055
mode 91 6.18 0.4822
mode 92 6.23 0.4361
mode 93 6.28 0.4877
mode 94 6.28 0.3324
mode 95 6.30 0.4069
mode 96 6.35 0.4112
mode 97 6.40 0.3600
mode 98 6.43 0.5138
mode 99 6.45 0.4541
mode 100 6.48 0.3811
mode 101 6.50 0.4284
mode 102 6.57 0.5181
mode 103 6.60 0.4876
mode 104 6.64 0.4239
mode 105 6.68 0.4181
mode 106 6.73 0.5117

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.