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***  TRANSCRIPTION 19-MAY-05 1ZR9  ***

Normal Mode Analysis for ID 2606121922511161981

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1710
mode 8 1.50 0.2004
mode 9 2.52 0.0657
mode 10 3.58 0.2922
mode 11 3.86 0.3993
mode 12 4.96 0.4569
mode 13 5.13 0.1313
mode 14 6.53 0.3114
mode 15 7.70 0.2583
mode 16 8.13 0.3324
mode 17 9.00 0.3923
mode 18 9.48 0.4312
mode 19 10.34 0.3533
mode 20 10.94 0.5970
mode 21 11.80 0.3873
mode 22 12.09 0.4033
mode 23 13.17 0.3188
mode 24 13.73 0.2281
mode 25 14.54 0.2752
mode 26 14.74 0.4460
mode 27 15.21 0.4181
mode 28 16.52 0.4464
mode 29 17.05 0.1075
mode 30 17.65 0.5246
mode 31 18.06 0.4041
mode 32 18.43 0.4148
mode 33 19.22 0.3161
mode 34 19.51 0.2821
mode 35 20.05 0.5245
mode 36 20.16 0.5158
mode 37 21.08 0.4733
mode 38 21.19 0.5310
mode 39 21.68 0.0609
mode 40 22.06 0.4626
mode 41 22.28 0.1840
mode 42 22.45 0.3576
mode 43 22.96 0.3198
mode 44 23.15 0.2870
mode 45 23.39 0.5284
mode 46 23.71 0.1059
mode 47 24.05 0.4114
mode 48 24.75 0.1234
mode 49 24.93 0.2553
mode 50 25.30 0.4525
mode 51 25.78 0.0929
mode 52 25.95 0.0455
mode 53 26.74 0.0598
mode 54 26.78 0.3543
mode 55 27.10 0.5089
mode 56 27.28 0.5619
mode 57 27.43 0.0956
mode 58 27.69 0.3117
mode 59 28.19 0.3838
mode 60 28.50 0.4427
mode 61 28.81 0.4125
mode 62 29.06 0.1389
mode 63 29.41 0.2515
mode 64 29.54 0.3323
mode 65 29.93 0.4934
mode 66 30.22 0.2588
mode 67 30.41 0.2665
mode 68 30.46 0.0708
mode 69 31.01 0.1005
mode 70 31.13 0.5031
mode 71 31.20 0.5405
mode 72 31.69 0.2899
mode 73 32.00 0.1862
mode 74 32.06 0.1796
mode 75 32.32 0.2970
mode 76 32.48 0.3437
mode 77 32.70 0.4263
mode 78 32.86 0.4600
mode 79 32.98 0.3130
mode 80 33.24 0.4327
mode 81 33.49 0.3445
mode 82 33.75 0.1336
mode 83 33.96 0.1093
mode 84 34.06 0.1649
mode 85 34.32 0.4591
mode 86 34.42 0.0365
mode 87 34.68 0.4719
mode 88 35.03 0.5330
mode 89 35.29 0.4616
mode 90 35.51 0.1870
mode 91 35.64 0.0701
mode 92 35.88 0.1302
mode 93 36.02 0.2706
mode 94 36.14 0.0438
mode 95 36.22 0.4988
mode 96 36.38 0.2331
mode 97 36.53 0.4550
mode 98 36.79 0.0164
mode 99 36.95 0.1434
mode 100 36.98 0.4665
mode 101 37.09 0.4379
mode 102 37.31 0.4146
mode 103 37.55 0.4820
mode 104 37.73 0.4417
mode 105 37.78 0.4721
mode 106 38.04 0.0595

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.