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***  Cluster2_zdock_7z1f_model5  ***

Normal Mode Analysis for ID 2607021445272007688

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 4 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0848
mode 8 1.44 0.0860
mode 9 1.63 0.0075
mode 10 2.31 0.1560
mode 11 2.41 0.0913
mode 12 2.46 0.0242
mode 13 3.21 0.0902
mode 14 4.06 0.1077
mode 15 4.46 0.4028
mode 16 4.96 0.1466
mode 17 5.10 0.2042
mode 18 5.59 0.0465
mode 19 5.86 0.0544
mode 20 6.00 0.2207
mode 21 6.09 0.1404
mode 22 6.74 0.0287
mode 23 6.93 0.1094
mode 24 8.23 0.1220
mode 25 8.53 0.3358
mode 26 8.73 0.2484
mode 27 9.30 0.2014
mode 28 9.78 0.2164
mode 29 9.98 0.2122
mode 30 10.59 0.1999
mode 31 10.80 0.1553
mode 32 11.43 0.2781
mode 33 12.18 0.2084
mode 34 12.28 0.2643
mode 35 12.74 0.2474
mode 36 13.64 0.0532
mode 37 13.73 0.6496
mode 38 14.46 0.1222
mode 39 14.82 0.1301
mode 40 15.33 0.0689
mode 41 15.85 0.0494
mode 42 16.27 0.1250
mode 43 16.60 0.2971
mode 44 16.96 0.3456
mode 45 17.63 0.1940
mode 46 18.46 0.1257
mode 47 18.99 0.1569
mode 48 20.07 0.3641
mode 49 21.50 0.2345
mode 50 21.59 0.0995
mode 51 22.84 0.1097
mode 52 23.36 0.1750
mode 53 24.13 0.0852
mode 54 25.00 0.3313
mode 55 25.35 0.3775
mode 56 26.51 0.1593
mode 57 26.97 0.2342
mode 58 27.69 0.1646
mode 59 27.89 0.1978
mode 60 28.73 0.1158
mode 61 29.08 0.1019
mode 62 29.82 0.1832
mode 63 31.06 0.1942
mode 64 31.81 0.2163
mode 65 33.31 0.1471
mode 66 34.56 0.2640
mode 67 34.89 0.1483
mode 68 35.73 0.0929
mode 69 35.76 0.1361
mode 70 36.50 0.0912
mode 71 37.83 0.1358
mode 72 38.52 0.1487
mode 73 38.72 0.1871
mode 74 41.10 0.2462
mode 75 41.34 0.1010
mode 76 41.99 0.0632
mode 77 42.67 0.2127
mode 78 43.96 0.1769
mode 79 44.62 0.2635
mode 80 45.06 0.2591
mode 81 45.34 0.0768
mode 82 47.42 0.2384
mode 83 47.45 0.0704
mode 84 48.42 0.0491
mode 85 49.89 0.2681
mode 86 51.96 0.0452
mode 87 52.12 0.2504
mode 88 52.27 0.0949
mode 89 53.99 0.3025
mode 90 55.04 0.2784
mode 91 58.38 0.0680
mode 92 59.15 0.2343
mode 93 59.49 0.1113
mode 94 59.75 0.1729
mode 95 59.87 0.1671
mode 96 60.41 0.0747
mode 97 62.43 0.1992
mode 98 63.56 0.1444
mode 99 65.11 0.0365
mode 100 66.73 0.1420
mode 101 67.60 0.0520
mode 102 68.39 0.1482
mode 103 69.57 0.0430
mode 104 70.00 0.1746
mode 105 71.53 0.0400
mode 106 73.08 0.0321

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.