CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0404
SER 770.0320
PRO 780.0170
VAL 790.0124
ALA 800.0145
GLY 810.0150
GLN 820.0096
LYS 830.0029
TYR 840.0024
ASP 850.0024
TYR 860.0032
ILE 870.0033
LEU 880.0045
VAL 890.0034
GLY 900.0029
GLY 910.0039
GLY 920.0043
THR 930.0037
ALA 940.0040
ALA 950.0048
CYS 960.0026
VAL 970.0025
LEU 980.0046
ALA 990.0042
ASN 1000.0047
ARG 1010.0050
LEU 1020.0065
SER 1030.0058
ALA 1040.0116
ASP 1050.0119
GLY 1060.0118
SER 1070.0082
LYS 1080.0057
ARG 1090.0025
VAL 1100.0040
LEU 1110.0054
VAL 1120.0072
LEU 1130.0051
GLU 1140.0028
ALA 1150.0053
GLY 1160.0114
PRO 1170.0202
ASP 1180.0294
ASN 1190.0294
THR 1200.0337
SER 1210.0299
ARG 1220.0242
ASP 1230.0162
VAL 1240.0083
LYS 1250.0065
ILE 1260.0105
PRO 1270.0092
ALA 1280.0021
ALA 1290.0045
ILE 1300.0054
THR 1310.0053
ARG 1320.0054
LEU 1330.0071
PHE 1340.0112
ARG 1350.0107
SER 1360.0141
PRO 1370.0276
LEU 1380.0130
ASP 1390.0114
TRP 1400.0126
ASN 1410.0115
LEU 1420.0103
PHE 1430.0130
SER 1440.0131
GLU 1450.0131
LEU 1460.0171
GLN 1470.0114
GLU 1480.0259
GLN 1490.0065
LEU 1500.0084
ALA 1510.0125
GLU 1520.0192
ARG 1530.0086
GLN 1540.0206
ILE 1550.0103
TYR 1560.0053
MET 1570.0048
ALA 1580.0057
ARG 1590.0064
GLY 1600.0076
ARG 1610.0089
LEU 1620.0077
LEU 1630.0110
GLY 1640.0082
GLY 1650.0040
SER 1660.0026
SER 1670.0059
ALA 1680.0063
THR 1690.0051
ASN 1700.0034
ALA 1710.0032
THR 1720.0029
LEU 1730.0038
TYR 1740.0026
HISD 1750.0024
ARG 1760.0019
GLY 1770.0029
ALA 1780.0032
ALA 1790.0047
GLY 1800.0065
ASP 1810.0061
TYR 1820.0048
ASP 1830.0085
ALA 1840.0105
TRP 1850.0078
GLY 1860.0087
VAL 1870.0067
GLU 1880.0043
GLY 1890.0024
TRP 1900.0014
SER 1910.0033
SER 1920.0022
GLU 1930.0040
ASP 1940.0023
VAL 1950.0038
LEU 1960.0043
SER 1970.0060
TRP 1980.0056
PHE 1990.0051
VAL 2000.0055
GLN 2010.0066
ALA 2020.0063
GLU 2030.0043
THR 2040.0036
ASN 2050.0029
ALA 2060.0037
ASP 2070.0047
PHE 2080.0074
GLY 2090.0101
PRO 2100.0088
GLY 2110.0076
ALA 2120.0059
TYR 2130.0031
HISH 2140.0028
GLY 2150.0056
SER 2160.0072
GLY 2170.0082
GLY 2180.0089
PRO 2190.0070
MET 2200.0049
ARG 2210.0029
VAL 2220.0045
GLU 2230.0083
ASN 2240.0106
PRO 2250.0104
ARG 2260.0095
TYR 2270.0207
THR 2280.0193
ASN 2290.0158
LYS 2300.0404
GLN 2310.0350
LEU 2320.0122
HISE 2330.0063
THR 2340.0096
ALA 2350.0094
PHE 2360.0042
PHE 2370.0040
LYS 2380.0057
ALA 2390.0093
ALA 2400.0120
GLU 2410.0166
GLU 2420.0247
VAL 2430.0261
GLY 2440.0309
LEU 2450.0102
THR 2460.0048
PRO 2470.0025
ASN 2480.0065
SER 2490.0097
ASP 2500.0071
PHE 2510.0040
ASN 2520.0027
ASP 2530.0034
TRP 2540.0048
SER 2550.0098
HISE 2560.0100
ASP 2570.0046
HISE 2580.0037
ALA 2590.0048
GLY 2600.0057
TYR 2610.0050
GLY 2620.0069
THR 2630.0066
PHE 2640.0061
GLN 2650.0065
VAL 2660.0056
MET 2670.0049
GLN 2680.0064
ASP 2690.0116
LYS 2700.0140
GLY 2710.0146
THR 2720.0056
ARG 2730.0029
ALA 2740.0016
ASP 2750.0036
MET 2760.0057
TYR 2770.0073
ARG 2780.0045
GLN 2790.0050
TYR 2800.0046
LEU 2810.0044
LYS 2820.0136
PRO 2830.0184
VAL 2840.0141
LEU 2850.0161
GLY 2860.0203
ARG 2870.0057
ARG 2880.0085
ASN 2890.0103
LEU 2900.0068
GLN 2910.0079
VAL 2920.0104
LEU 2930.0094
THR 2940.0089
GLY 2950.0076
ALA 2960.0051
ALA 2970.0029
VAL 2980.0017
THR 2990.0030
LYS 3000.0025
VAL 3010.0032
ASN 3020.0040
ILE 3030.0060
ASP 3040.0076
GLN 3050.0129
ALA 3060.0117
ALA 3070.0123
GLY 3080.0055
LYS 3090.0039
ALA 3100.0077
GLN 3110.0082
ALA 3120.0063
LEU 3130.0052
GLY 3140.0025
VAL 3150.0034
GLU 3160.0052
PHE 3170.0066
SER 3180.0054
THR 3190.0068
ASP 3200.0118
GLY 3210.0154
PRO 3220.0169
THR 3230.0264
GLY 3240.0131
GLU 3250.0116
ARG 3260.0062
LEU 3270.0064
SER 3280.0079
ALA 3290.0046
GLU 3300.0025
LEU 3310.0007
ALA 3320.0043
PRO 3330.0114
GLY 3340.0122
GLY 3350.0055
GLU 3360.0056
VAL 3370.0049
ILE 3380.0045
MET 3390.0046
CYS 3400.0045
ALA 3410.0046
GLY 3420.0040
ALA 3430.0039
VAL 3440.0078
HISD 3450.0074
THR 3460.0053
PRO 3470.0039
PHE 3480.0047
LEU 3490.0039
LEU 3500.0043
LYS 3510.0037
HISE 3520.0037
SER 3530.0049
GLY 3540.0046
VAL 3550.0049
GLY 3560.0032
PRO 3570.0043
SER 3580.0071
ALA 3590.0090
GLU 3600.0072
LEU 3610.0047
LYS 3620.0102
GLU 3630.0123
PHE 3640.0087
GLY 3650.0054
ILE 3660.0026
PRO 3670.0071
VAL 3680.0058
VAL 3690.0069
SER 3700.0058
ASN 3710.0040
LEU 3720.0031
ALA 3730.0062
GLY 3740.0037
VAL 3750.0029
GLY 3760.0024
GLN 3770.0060
ASN 3780.0078
LEU 3790.0075
GLN 3800.0071
ASP 3810.0063
GLN 3820.0061
PRO 3830.0050
ALA 3840.0046
CYS 3850.0052
LEU 3860.0054
THR 3870.0040
ALA 3880.0036
ALA 3890.0074
PRO 3900.0077
VAL 3910.0092
LYS 3920.0052
GLU 3930.0102
LYS 3940.0093
TYR 3950.0146
ASP 3960.0191
GLY 3970.0237
ILE 3980.0085
ALA 3990.0083
ILE 4000.0092
SER 4010.0087
ASP 4020.0088
HISE 4030.0081
ILE 4040.0077
TYR 4050.0069
ASN 4060.0089
GLU 4070.0105
LYS 4080.0068
GLY 4090.0098
GLN 4100.0081
ILE 4110.0086
ARG 4120.0109
LYS 4130.0086
ARG 4140.0062
ALA 4150.0077
ILE 4160.0057
ALA 4170.0077
SER 4180.0107
TYR 4190.0115
LEU 4200.0142
LEU 4210.0130
GLY 4220.0211
GLY 4230.0230
ARG 4240.0118
GLY 4250.0050
GLY 4260.0028
LEU 4270.0044
THR 4280.0048
SER 4290.0035
THR 4300.0050
GLY 4310.0031
CYS 4320.0022
ASP 4330.0041
ARG 4340.0053
GLY 4350.0043
ALA 4360.0054
PHE 4370.0034
VAL 4380.0038
ARG 4390.0048
THR 4400.0087
ALA 4410.0136
GLY 4420.0141
GLN 4430.0075
ALA 4440.0056
LEU 4450.0056
PRO 4460.0036
ASP 4470.0056
LEU 4480.0038
GLN 4490.0030
VAL 4500.0026
ARG 4510.0023
PHE 4520.0027
VAL 4530.0035
PRO 4540.0054
GLY 4550.0075
MET 4560.0031
ALA 4570.0028
LEU 4580.0118
ASP 4590.0113
PRO 4600.0076
ASP 4610.0106
GLY 4620.0108
VAL 4630.0093
SER 4640.0129
THR 4650.0123
TYR 4660.0120
VAL 4670.0174
ARG 4680.0145
PHE 4690.0079
ALA 4700.0109
LYS 4710.0106
PHE 4720.0051
GLN 4730.0071
SER 4740.0133
GLN 4750.0139
GLY 4760.0116
LEU 4770.0089
LYS 4780.0067
TRP 4790.0046
PRO 4800.0070
SER 4810.0072
GLY 4820.0091
ILE 4830.0085
THR 4840.0068
MET 4850.0024
GLN 4860.0030
LEU 4870.0043
ILE 4880.0051
ALA 4890.0059
CYS 4900.0058
ARG 4910.0070
PRO 4920.0066
GLN 4930.0063
SER 4940.0113
THR 4950.0112
GLY 4960.0115
SER 4970.0082
VAL 4980.0049
GLY 4990.0062
LEU 5000.0045
LYS 5010.0106
SER 5020.0107
ALA 5030.0056
ASP 5040.0053
PRO 5050.0023
PHE 5060.0094
ALA 5070.0126
PRO 5080.0141
PRO 5090.0088
LYS 5100.0071
LEU 5110.0066
SER 5120.0110
PRO 5130.0106
GLY 5140.0118
TYR 5150.0084
LEU 5160.0068
THR 5170.0115
ASP 5180.0149
LYS 5190.0068
ASP 5200.0212
GLY 5210.0080
ALA 5220.0075
ASP 5230.0067
LEU 5240.0074
ALA 5250.0083
THR 5260.0082
LEU 5270.0065
ARG 5280.0079
LYS 5290.0066
GLY 5300.0033
ILE 5310.0036
HISE 5320.0039
TRP 5330.0051
ALA 5340.0042
ARG 5350.0018
ASP 5360.0085
VAL 5370.0069
ALA 5380.0068
ARG 5390.0063
SER 5400.0075
SER 5410.0142
ALA 5420.0081
LEU 5430.0084
SER 5440.0108
GLU 5450.0154
TYR 5460.0157
LEU 5470.0135
ASP 5480.0111
GLY 5490.0075
GLU 5500.0062
LEU 5510.0055
PHE 5520.0060
PRO 5530.0063
GLY 5540.0088
SER 5550.0081
GLY 5560.0085
VAL 5570.0091
VAL 5580.0035
SER 5590.0077
ASP 5600.0038
ASP 5610.0080
GLN 5620.0121
ILE 5630.0087
ASP 5640.0083
GLU 5650.0093
TYR 5660.0066
ILE 5670.0045
ARG 5680.0034
ARG 5690.0053
SER 5700.0034
ILE 5710.0021
HISD 5720.0039
SER 5730.0033
SER 5740.0033
ASN 5750.0021
ALA 5760.0042
ILE 5770.0059
THR 5780.0051
GLY 5790.0055
THR 5800.0051
CYS 5810.0034
LYS 5820.0047
MET 5830.0047
GLY 5840.0078
ASN 5850.0054
ALA 5860.0079
GLY 5870.0260
ASP 5880.0142
SER 5890.0222
SER 5900.0141
SER 5910.0087
VAL 5920.0030
VAL 5930.0019
ASP 5940.0019
ASN 5950.0024
GLN 5960.0057
LEU 5970.0052
ARG 5980.0048
VAL 5990.0035
HISE 6000.0013
GLY 6010.0023
VAL 6020.0071
GLU 6030.0074
GLY 6040.0068
LEU 6050.0056
ARG 6060.0061
VAL 6070.0062
VAL 6080.0034
ASP 6090.0036
ALA 6100.0038
SER 6110.0029
VAL 6120.0035
VAL 6130.0031
PRO 6140.0080
LYS 6150.0075
ILE 6160.0064
PRO 6170.0048
GLY 6180.0046
GLY 6190.0040
GLN 6200.0015
THR 6210.0021
GLY 6220.0038
ALA 6230.0033
PRO 6240.0033
VAL 6250.0031
VAL 6260.0054
MET 6270.0044
ILE 6280.0041
ALA 6290.0061
GLU 6300.0051
ARG 6310.0051
ALA 6320.0077
ALA 6330.0076
ALA 6340.0068
LEU 6350.0096
LEU 6360.0101
THR 6370.0103
GLY 6380.0148
LYS 6390.0083
ALA 6400.0071
THR 6410.0075
ILE 6420.0050
GLY 6430.0040
ALA 6440.0092
SER 6450.0023
ALA 6460.0032
ALA 6470.0037
ALA 6480.0090
PRO 6490.0037

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.