CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0477
SER 770.0148
PRO 780.0091
VAL 790.0064
ALA 800.0132
GLY 810.0150
GLN 820.0140
LYS 830.0136
TYR 840.0103
ASP 850.0066
TYR 860.0055
ILE 870.0069
LEU 880.0070
VAL 890.0051
GLY 900.0050
GLY 910.0053
GLY 920.0025
THR 930.0023
ALA 940.0016
ALA 950.0022
CYS 960.0026
VAL 970.0026
LEU 980.0038
ALA 990.0037
ASN 1000.0037
ARG 1010.0050
LEU 1020.0040
SER 1030.0045
ALA 1040.0114
ASP 1050.0080
GLY 1060.0155
SER 1070.0208
LYS 1080.0133
ARG 1090.0152
VAL 1100.0086
LEU 1110.0082
VAL 1120.0081
LEU 1130.0046
GLU 1140.0063
ALA 1150.0083
GLY 1160.0101
PRO 1170.0084
ASP 1180.0070
ASN 1190.0057
THR 1200.0031
SER 1210.0068
ARG 1220.0107
ASP 1230.0139
VAL 1240.0122
LYS 1250.0090
ILE 1260.0095
PRO 1270.0103
ALA 1280.0114
ALA 1290.0121
ILE 1300.0125
THR 1310.0117
ARG 1320.0097
LEU 1330.0084
PHE 1340.0027
ARG 1350.0028
SER 1360.0033
PRO 1370.0085
LEU 1380.0028
ASP 1390.0051
TRP 1400.0051
ASN 1410.0041
LEU 1420.0036
PHE 1430.0040
SER 1440.0075
GLU 1450.0097
LEU 1460.0093
GLN 1470.0097
GLU 1480.0109
GLN 1490.0091
LEU 1500.0090
ALA 1510.0088
GLU 1520.0035
ARG 1530.0015
GLN 1540.0026
ILE 1550.0021
TYR 1560.0010
MET 1570.0036
ALA 1580.0009
ARG 1590.0007
GLY 1600.0033
ARG 1610.0072
LEU 1620.0056
LEU 1630.0062
GLY 1640.0065
GLY 1650.0063
SER 1660.0069
SER 1670.0097
ALA 1680.0078
THR 1690.0086
ASN 1700.0120
ALA 1710.0116
THR 1720.0112
LEU 1730.0031
TYR 1740.0017
HISD 1750.0051
ARG 1760.0065
GLY 1770.0053
ALA 1780.0035
ALA 1790.0046
GLY 1800.0065
ASP 1810.0039
TYR 1820.0049
ASP 1830.0128
ALA 1840.0117
TRP 1850.0062
GLY 1860.0111
VAL 1870.0116
GLU 1880.0112
GLY 1890.0110
TRP 1900.0107
SER 1910.0160
SER 1920.0095
GLU 1930.0257
ASP 1940.0161
VAL 1950.0132
LEU 1960.0104
SER 1970.0064
TRP 1980.0069
PHE 1990.0065
VAL 2000.0030
GLN 2010.0037
ALA 2020.0022
GLU 2030.0041
THR 2040.0040
ASN 2050.0036
ALA 2060.0109
ASP 2070.0115
PHE 2080.0061
GLY 2090.0100
PRO 2100.0101
GLY 2110.0134
ALA 2120.0135
TYR 2130.0074
HISH 2140.0039
GLY 2150.0025
SER 2160.0047
GLY 2170.0065
GLY 2180.0080
PRO 2190.0095
MET 2200.0073
ARG 2210.0098
VAL 2220.0085
GLU 2230.0114
ASN 2240.0146
PRO 2250.0117
ARG 2260.0096
TYR 2270.0049
THR 2280.0057
ASN 2290.0079
LYS 2300.0089
GLN 2310.0136
LEU 2320.0097
HISE 2330.0055
THR 2340.0089
ALA 2350.0106
PHE 2360.0086
PHE 2370.0084
LYS 2380.0148
ALA 2390.0120
ALA 2400.0092
GLU 2410.0138
GLU 2420.0169
VAL 2430.0105
GLY 2440.0151
LEU 2450.0045
THR 2460.0053
PRO 2470.0101
ASN 2480.0139
SER 2490.0139
ASP 2500.0143
PHE 2510.0115
ASN 2520.0107
ASP 2530.0107
TRP 2540.0117
SER 2550.0204
HISE 2560.0185
ASP 2570.0147
HISE 2580.0127
ALA 2590.0144
GLY 2600.0070
TYR 2610.0089
GLY 2620.0101
THR 2630.0106
PHE 2640.0062
GLN 2650.0055
VAL 2660.0085
MET 2670.0088
GLN 2680.0112
ASP 2690.0079
LYS 2700.0084
GLY 2710.0122
THR 2720.0103
ARG 2730.0113
ALA 2740.0125
ASP 2750.0091
MET 2760.0082
TYR 2770.0085
ARG 2780.0121
GLN 2790.0105
TYR 2800.0091
LEU 2810.0043
LYS 2820.0091
PRO 2830.0124
VAL 2840.0049
LEU 2850.0047
GLY 2860.0055
ARG 2870.0080
ARG 2880.0076
ASN 2890.0098
LEU 2900.0061
GLN 2910.0055
VAL 2920.0052
LEU 2930.0027
THR 2940.0063
GLY 2950.0085
ALA 2960.0046
ALA 2970.0030
VAL 2980.0008
THR 2990.0020
LYS 3000.0024
VAL 3010.0037
ASN 3020.0052
ILE 3030.0068
ASP 3040.0093
GLN 3050.0049
ALA 3060.0128
ALA 3070.0265
GLY 3080.0419
LYS 3090.0226
ALA 3100.0100
GLN 3110.0086
ALA 3120.0072
LEU 3130.0073
GLY 3140.0078
VAL 3150.0052
GLU 3160.0028
PHE 3170.0048
SER 3180.0095
THR 3190.0129
ASP 3200.0170
GLY 3210.0253
PRO 3220.0281
THR 3230.0378
GLY 3240.0192
GLU 3250.0186
ARG 3260.0091
LEU 3270.0086
SER 3280.0079
ALA 3290.0092
GLU 3300.0094
LEU 3310.0074
ALA 3320.0140
PRO 3330.0183
GLY 3340.0137
GLY 3350.0038
GLU 3360.0023
VAL 3370.0039
ILE 3380.0037
MET 3390.0037
CYS 3400.0038
ALA 3410.0056
GLY 3420.0052
ALA 3430.0056
VAL 3440.0065
HISD 3450.0062
THR 3460.0053
PRO 3470.0054
PHE 3480.0053
LEU 3490.0053
LEU 3500.0056
LYS 3510.0044
HISE 3520.0043
SER 3530.0065
GLY 3540.0051
VAL 3550.0058
GLY 3560.0068
PRO 3570.0053
SER 3580.0035
ALA 3590.0036
GLU 3600.0028
LEU 3610.0034
LYS 3620.0094
GLU 3630.0117
PHE 3640.0131
GLY 3650.0123
ILE 3660.0092
PRO 3670.0088
VAL 3680.0035
VAL 3690.0026
SER 3700.0069
ASN 3710.0078
LEU 3720.0080
ALA 3730.0062
GLY 3740.0068
VAL 3750.0055
GLY 3760.0031
GLN 3770.0028
ASN 3780.0018
LEU 3790.0041
GLN 3800.0060
ASP 3810.0075
GLN 3820.0087
PRO 3830.0067
ALA 3840.0050
CYS 3850.0039
LEU 3860.0042
THR 3870.0062
ALA 3880.0076
ALA 3890.0071
PRO 3900.0069
VAL 3910.0062
LYS 3920.0061
GLU 3930.0063
LYS 3940.0077
TYR 3950.0032
ASP 3960.0018
GLY 3970.0049
ILE 3980.0057
ALA 3990.0053
ILE 4000.0048
SER 4010.0035
ASP 4020.0035
HISE 4030.0035
ILE 4040.0050
TYR 4050.0051
ASN 4060.0052
GLU 4070.0014
LYS 4080.0119
GLY 4090.0159
GLN 4100.0102
ILE 4110.0100
ARG 4120.0092
LYS 4130.0223
ARG 4140.0213
ALA 4150.0214
ILE 4160.0159
ALA 4170.0111
SER 4180.0080
TYR 4190.0042
LEU 4200.0073
LEU 4210.0096
GLY 4220.0277
GLY 4230.0140
ARG 4240.0132
GLY 4250.0064
GLY 4260.0061
LEU 4270.0040
THR 4280.0052
SER 4290.0042
THR 4300.0069
GLY 4310.0050
CYS 4320.0033
ASP 4330.0043
ARG 4340.0042
GLY 4350.0045
ALA 4360.0062
PHE 4370.0090
VAL 4380.0088
ARG 4390.0088
THR 4400.0053
ALA 4410.0043
GLY 4420.0091
GLN 4430.0145
ALA 4440.0146
LEU 4450.0151
PRO 4460.0092
ASP 4470.0066
LEU 4480.0076
GLN 4490.0056
VAL 4500.0045
ARG 4510.0022
PHE 4520.0016
VAL 4530.0028
PRO 4540.0037
GLY 4550.0066
MET 4560.0076
ALA 4570.0085
LEU 4580.0126
ASP 4590.0096
PRO 4600.0070
ASP 4610.0070
GLY 4620.0070
VAL 4630.0055
SER 4640.0108
THR 4650.0108
TYR 4660.0089
VAL 4670.0083
ARG 4680.0085
PHE 4690.0072
ALA 4700.0048
LYS 4710.0016
PHE 4720.0050
GLN 4730.0089
SER 4740.0129
GLN 4750.0194
GLY 4760.0112
LEU 4770.0110
LYS 4780.0098
TRP 4790.0047
PRO 4800.0047
SER 4810.0052
GLY 4820.0043
ILE 4830.0043
THR 4840.0046
MET 4850.0025
GLN 4860.0026
LEU 4870.0043
ILE 4880.0075
ALA 4890.0079
CYS 4900.0086
ARG 4910.0087
PRO 4920.0087
GLN 4930.0077
SER 4940.0103
THR 4950.0059
GLY 4960.0045
SER 4970.0071
VAL 4980.0072
GLY 4990.0073
LEU 5000.0022
LYS 5010.0045
SER 5020.0040
ALA 5030.0046
ASP 5040.0046
PRO 5050.0064
PHE 5060.0074
ALA 5070.0035
PRO 5080.0020
PRO 5090.0069
LYS 5100.0080
LEU 5110.0086
SER 5120.0106
PRO 5130.0100
GLY 5140.0085
TYR 5150.0064
LEU 5160.0085
THR 5170.0176
ASP 5180.0401
LYS 5190.0172
ASP 5200.0477
GLY 5210.0272
ALA 5220.0228
ASP 5230.0148
LEU 5240.0115
ALA 5250.0125
THR 5260.0109
LEU 5270.0055
ARG 5280.0070
LYS 5290.0058
GLY 5300.0029
ILE 5310.0038
HISE 5320.0048
TRP 5330.0064
ALA 5340.0063
ARG 5350.0089
ASP 5360.0060
VAL 5370.0050
ALA 5380.0076
ARG 5390.0115
SER 5400.0100
SER 5410.0167
ALA 5420.0094
LEU 5430.0073
SER 5440.0088
GLU 5450.0026
TYR 5460.0018
LEU 5470.0019
ASP 5480.0124
GLY 5490.0117
GLU 5500.0091
LEU 5510.0106
PHE 5520.0087
PRO 5530.0085
GLY 5540.0111
SER 5550.0062
GLY 5560.0072
VAL 5570.0111
VAL 5580.0125
SER 5590.0218
ASP 5600.0164
ASP 5610.0209
GLN 5620.0172
ILE 5630.0110
ASP 5640.0101
GLU 5650.0095
TYR 5660.0054
ILE 5670.0029
ARG 5680.0021
ARG 5690.0039
SER 5700.0038
ILE 5710.0040
HISD 5720.0033
SER 5730.0054
SER 5740.0080
ASN 5750.0079
ALA 5760.0090
ILE 5770.0074
THR 5780.0063
GLY 5790.0029
THR 5800.0025
CYS 5810.0048
LYS 5820.0065
MET 5830.0089
GLY 5840.0117
ASN 5850.0071
ALA 5860.0245
GLY 5870.0441
ASP 5880.0111
SER 5890.0445
SER 5900.0223
SER 5910.0141
VAL 5920.0111
VAL 5930.0086
ASP 5940.0095
ASN 5950.0088
GLN 5960.0082
LEU 5970.0070
ARG 5980.0091
VAL 5990.0062
HISE 6000.0069
GLY 6010.0114
VAL 6020.0082
GLU 6030.0058
GLY 6040.0036
LEU 6050.0036
ARG 6060.0039
VAL 6070.0037
VAL 6080.0024
ASP 6090.0032
ALA 6100.0032
SER 6110.0015
VAL 6120.0012
VAL 6130.0027
PRO 6140.0040
LYS 6150.0064
ILE 6160.0084
PRO 6170.0070
GLY 6180.0079
GLY 6190.0086
GLN 6200.0084
THR 6210.0079
GLY 6220.0071
ALA 6230.0033
PRO 6240.0037
VAL 6250.0042
VAL 6260.0043
MET 6270.0048
ILE 6280.0042
ALA 6290.0032
GLU 6300.0029
ARG 6310.0030
ALA 6320.0049
ALA 6330.0066
ALA 6340.0072
LEU 6350.0080
LEU 6360.0101
THR 6370.0116
GLY 6380.0200
LYS 6390.0196
ALA 6400.0156
THR 6410.0216
ILE 6420.0047
GLY 6430.0058
ALA 6440.0026
SER 6450.0008
ALA 6460.0007
ALA 6470.0015
ALA 6480.0025
PRO 6490.0009

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.